Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MTND5P21-201ENST00000531961 522 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HDAC4P56524 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.6□□□□□ -1.51
HDAC4P56524 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.6□□□□□ -1.51
HDAC4P56524 AC106785.3-201ENST00000564064 847 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 BNIP3P35-201ENST00000604530 490 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 AL450270.1-201ENST00000606160 391 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 AC211433.2-201ENST00000608433 387 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 SDR42E1P1-201ENST00000611327 477 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HDAC4P56524 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.6□□□□□ -1.51
HDAC4P56524 AC019080.5-201ENST00000624891 757 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 AP003400.3-201ENST00000624904 346 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.6□□□□□ -1.51
HDAC4P56524 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HDAC4P56524 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HDAC4P56524 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HDAC4P56524 AL138820.1-201ENST00000617901 5305 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HDAC4P56524 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC4P56524 AC017002.4-201ENST00000604721 1525 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.59□□□□□ -1.51
HDAC4P56524 AC092376.2-201ENST00000622621 4116 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.59□□□□□ -1.51
HDAC4P56524 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC4P56524 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC4P56524 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC4P56524 AC104297.1-201ENST00000393779 870 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
HDAC4P56524 PTGES3P2-201ENST00000407942 482 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
HDAC4P56524 HSFY1P1-201ENST00000423928 1178 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC4P56524 RPS26P4-201ENST00000431743 355 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 CYCSP12-201ENST00000437729 300 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.59□□□□□ -1.51
HDAC4P56524 GAPDHP25-201ENST00000447061 1001 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 AC090804.1-201ENST00000448870 490 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.59□□□□□ -1.51
HDAC4P56524 RPL7P45-201ENST00000455851 743 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 LARP7P4-201ENST00000481075 878 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 AC021193.1-201ENST00000511607 420 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.59□□□□□ -1.51
HDAC4P56524 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HDAC4P56524 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 IGLV2-28-201ENST00000520681 304 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.59□□□□□ -1.51
HDAC4P56524 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.59□□□□□ -1.51
HDAC4P56524 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.59□□□□□ -1.51
HDAC4P56524 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC4P56524 AC005341.1-201ENST00000571086 708 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.59□□□□□ -1.51
HDAC4P56524 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 BMS1P7-201ENST00000602440 1052 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 AC109583.2-201ENST00000617367 129 ntBASIC5.59□□□□□ -1.51
HDAC4P56524 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
HDAC4P56524 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HDAC4P56524 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HDAC4P56524 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.59□□□□□ -1.51
HDAC4P56524 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.59□□□□□ -1.51
HDAC4P56524 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HDAC4P56524 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HDAC4P56524 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HDAC4P56524 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
HDAC4P56524 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HDAC4P56524 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
HDAC4P56524 RNU1-77P-201ENST00000390868 162 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 RNA5SP339-201ENST00000390987 122 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 U3.25-201ENST00000391209 220 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 AL390774.1-201ENST00000411924 246 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AC046176.1-201ENST00000435260 1170 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC4P56524 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC4P56524 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.58□□□□□ -1.52
HDAC4P56524 RPS26P41-201ENST00000450370 284 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AC002553.2-201ENST00000453217 340 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 CBX1P2-201ENST00000453841 458 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.58□□□□□ -1.52
HDAC4P56524 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC4P56524 RPEP1-201ENST00000504507 658 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HDAC4P56524 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.58□□□□□ -1.52
HDAC4P56524 HMGB1P46-201ENST00000520062 610 ntBASIC5.58□□□□□ -1.52
HDAC4P56524 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms