Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RN7SKP145-201ENST00000363291 303 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 MIR421-201ENST00000365696 85 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AL078599.1-201ENST00000402075 293 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AL512430.2-201ENST00000406786 339 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.38□□□□□ -1.55
LIMK1P53667 MRPS33P4-201ENST00000434892 317 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.38□□□□□ -1.55
LIMK1P53667 AC096775.1-201ENST00000437724 448 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.38□□□□□ -1.55
LIMK1P53667 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.38□□□□□ -1.55
LIMK1P53667 AC092106.1-201ENST00000444291 373 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.38□□□□□ -1.55
LIMK1P53667 AC023271.1-201ENST00000445936 1090 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 CASP3P1-201ENST00000446037 609 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 CCRL1P1-201ENST00000449542 1053 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.38□□□□□ -1.55
LIMK1P53667 RN7SL197P-201ENST00000466981 299 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AC004980.4-201ENST00000513375 203 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.38□□□□□ -1.55
LIMK1P53667 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LIMK1P53667 OR4A43P-201ENST00000532938 908 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AC024940.3-201ENST00000538551 316 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.38□□□□□ -1.55
LIMK1P53667 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.38□□□□□ -1.55
LIMK1P53667 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.38□□□□□ -1.55
LIMK1P53667 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.38□□□□□ -1.55
LIMK1P53667 AC092868.3-201ENST00000560515 784 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AL163952.1-202ENST00000569625 600 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.38□□□□□ -1.55
LIMK1P53667 DPRXP4-201ENST00000578053 568 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.38□□□□□ -1.55
LIMK1P53667 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.38□□□□□ -1.55
LIMK1P53667 AC007342.7-201ENST00000624610 2337 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LIMK1P53667 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LIMK1P53667 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LIMK1P53667 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.38□□□□□ -1.55
LIMK1P53667 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LIMK1P53667 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.38□□□□□ -1.55
LIMK1P53667 OR55B1P-203ENST00000641518 2602 ntBASIC5.38□□□□□ -1.55
LIMK1P53667 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LIMK1P53667 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LIMK1P53667 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LIMK1P53667 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.38□□□□□ -1.55
LIMK1P53667 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.37□□□□□ -1.55
LIMK1P53667 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.37□□□□□ -1.55
LIMK1P53667 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 BX005019.1-201ENST00000561881 1810 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 SNORA27.3-201ENST00000364937 134 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LIMK1P53667 MIR130A-201ENST00000385274 89 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LIMK1P53667 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 OR1F12-201ENST00000402365 945 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 HMGN2P27-201ENST00000427352 270 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.37□□□□□ -1.55
LIMK1P53667 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.37□□□□□ -1.55
LIMK1P53667 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 AL157884.3-201ENST00000448273 1184 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AP002345.1-201ENST00000456493 928 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AC096741.1-201ENST00000472250 846 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 GLUD1P3-202ENST00000508551 200 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 HMGB1P44-201ENST00000508597 572 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.37□□□□□ -1.55
LIMK1P53667 ACTR6P1-201ENST00000514311 1104 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 SEPT10P1-201ENST00000517342 1162 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.37□□□□□ -1.55
LIMK1P53667 C1GALT1P3-201ENST00000522049 819 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.37□□□□□ -1.55
LIMK1P53667 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.37□□□□□ -1.55
LIMK1P53667 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.37□□□□□ -1.55
LIMK1P53667 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.37□□□□□ -1.55
LIMK1P53667 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.37□□□□□ -1.55
LIMK1P53667 RBM22P1-201ENST00000578589 1214 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.37□□□□□ -1.55
LIMK1P53667 MIR4660-201ENST00000583549 74 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.37□□□□□ -1.55
LIMK1P53667 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.37□□□□□ -1.55
LIMK1P53667 AC008745.1-201ENST00000604064 271 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 EIF3FP1-201ENST00000613970 806 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AC009032.1-201ENST00000617574 431 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AC099494.2-201ENST00000623371 978 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.37□□□□□ -1.55
LIMK1P53667 AC091948.2-201ENST00000636510 279 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LIMK1P53667 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LIMK1P53667 MT-RNR2-201ENST00000387347 1559 ntBASIC5.37□□□□□ -1.55
LIMK1P53667 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.37□□□□□ -1.55
LIMK1P53667 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.37□□□□□ -1.55
LIMK1P53667 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LIMK1P53667 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LIMK1P53667 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LIMK1P53667 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LIMK1P53667 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms