Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MRE11P49959 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MRE11P49959 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 AC104964.3-201ENST00000606115 2860 ntBASIC6.6□□□□□ -1.35
MRE11P49959 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 AL078595.1-201ENST00000404458 226 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AC211486.3-201ENST00000412694 621 ntBASIC6.6□□□□□ -1.35
MRE11P49959 DHFRP2-201ENST00000414224 547 ntBASIC6.6□□□□□ -1.35
MRE11P49959 RPL12P43-201ENST00000420608 499 ntBASIC6.6□□□□□ -1.35
MRE11P49959 NPM1P26-201ENST00000426339 738 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 AL772161.1-201ENST00000439130 476 ntBASIC6.6□□□□□ -1.35
MRE11P49959 KATNBL1P3-201ENST00000443475 909 ntBASIC6.6□□□□□ -1.35
MRE11P49959 EEF1B2P6-201ENST00000445713 673 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.6□□□□□ -1.35
MRE11P49959 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.6□□□□□ -1.35
MRE11P49959 CFL1P4-201ENST00000451536 498 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 VN1R40P-201ENST00000455196 941 ntBASIC6.6□□□□□ -1.35
MRE11P49959 RN7SL72P-201ENST00000460697 269 ntBASIC6.6□□□□□ -1.35
MRE11P49959 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.6□□□□□ -1.35
MRE11P49959 RN7SL329P-201ENST00000467740 299 ntBASIC6.6□□□□□ -1.35
MRE11P49959 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.6□□□□□ -1.35
MRE11P49959 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 OR2A3P-201ENST00000493774 953 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
MRE11P49959 AC112518.2-201ENST00000508565 425 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.6□□□□□ -1.35
MRE11P49959 AC098976.1-201ENST00000513014 541 ntBASIC6.6□□□□□ -1.35
MRE11P49959 SNORA19.3-201ENST00000516165 130 ntBASIC6.6□□□□□ -1.35
MRE11P49959 OR4V1P-201ENST00000525394 1140 ntBASIC6.6□□□□□ -1.35
MRE11P49959 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 AC007834.2-201ENST00000536310 343 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.6□□□□□ -1.35
MRE11P49959 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.6□□□□□ -1.35
MRE11P49959 RPL10P14-201ENST00000565265 298 ntBASIC6.6□□□□□ -1.35
MRE11P49959 MTND3P13-201ENST00000574391 343 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AC127024.5-201ENST00000580085 462 ntBASIC6.6□□□□□ -1.35
MRE11P49959 MIR4701-201ENST00000583094 63 ntBASIC6.6□□□□□ -1.35
MRE11P49959 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 PCNAP1-202ENST00000595299 752 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AL022067.1-201ENST00000602426 454 ntBASIC6.6□□□□□ -1.35
MRE11P49959 RPL12P48-201ENST00000605620 304 ntBASIC6.6□□□□□ -1.35
MRE11P49959 SNORA74.4-201ENST00000607595 199 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AC245008.1-201ENST00000608123 476 ntBASIC6.6□□□□□ -1.35
MRE11P49959 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.6□□□□□ -1.35
MRE11P49959 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.6□□□□□ -1.35
MRE11P49959 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.6□□□□□ -1.35
MRE11P49959 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.6□□□□□ -1.35
MRE11P49959 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.6□□□□□ -1.35
MRE11P49959 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 HSPD1P7-201ENST00000447985 1686 ntBASIC6.6□□□□□ -1.35
MRE11P49959 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.6□□□□□ -1.35
MRE11P49959 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.6□□□□□ -1.35
MRE11P49959 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
MRE11P49959 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.6□□□□□ -1.35
MRE11P49959 AL442128.2-201ENST00000620246 1824 ntBASIC6.6□□□□□ -1.35
MRE11P49959 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
MRE11P49959 AC025574.1-201ENST00000554784 1653 ntBASIC6.59□□□□□ -1.35
MRE11P49959 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
MRE11P49959 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.59□□□□□ -1.35
MRE11P49959 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.59□□□□□ -1.35
MRE11P49959 AC096921.1-201ENST00000411661 375 ntBASIC6.59□□□□□ -1.35
MRE11P49959 NPM1P40-201ENST00000412758 733 ntBASIC6.59□□□□□ -1.35
MRE11P49959 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.59□□□□□ -1.35
MRE11P49959 AC099677.3-201ENST00000427081 395 ntBASIC6.59□□□□□ -1.35
MRE11P49959 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
MRE11P49959 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.59□□□□□ -1.35
MRE11P49959 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 SOCS5P1-201ENST00000440415 949 ntBASIC6.59□□□□□ -1.35
MRE11P49959 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 RNFT1P2-201ENST00000443064 757 ntBASIC6.59□□□□□ -1.35
MRE11P49959 LRRC37A14P-201ENST00000452297 462 ntBASIC6.59□□□□□ -1.35
MRE11P49959 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.59□□□□□ -1.35
MRE11P49959 NPM1P29-201ENST00000483112 803 ntBASIC6.59□□□□□ -1.35
MRE11P49959 AL049874.2-201ENST00000492636 288 ntBASIC6.59□□□□□ -1.35
MRE11P49959 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.59□□□□□ -1.35
MRE11P49959 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.59□□□□□ -1.35
MRE11P49959 AC114781.3-201ENST00000512083 142 ntBASIC6.59□□□□□ -1.35
MRE11P49959 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.59□□□□□ -1.35
MRE11P49959 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.59□□□□□ -1.35
MRE11P49959 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms