Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCN4AP35499 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.82□□□□□ -1.48
SCN4AP35499 SNRPCP3-201ENST00000474888 476 ntBASIC5.82□□□□□ -1.48
SCN4AP35499 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.82□□□□□ -1.48
SCN4AP35499 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN4AP35499 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.82□□□□□ -1.48
SCN4AP35499 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SCN4AP35499 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SCN4AP35499 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN4AP35499 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.82□□□□□ -1.48
SCN4AP35499 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN4AP35499 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SCN4AP35499 SALL4P2-201ENST00000423288 2910 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN4AP35499 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN4AP35499 OR2A3P-201ENST00000493774 953 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN4AP35499 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SCN4AP35499 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN4AP35499 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN4AP35499 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN4AP35499 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN4AP35499 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SCN4AP35499 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN4AP35499 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN4AP35499 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 SNORA70.10-201ENST00000384515 134 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 RN7SKP267-201ENST00000410381 285 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN4AP35499 AL358176.3-201ENST00000420757 454 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN4AP35499 RPS12P31-201ENST00000491419 398 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.81□□□□□ -1.48
SCN4AP35499 IMPA1P1-201ENST00000510718 842 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 BUD31P1-201ENST00000521828 359 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.81□□□□□ -1.48
SCN4AP35499 AC006130.2-201ENST00000586202 326 ntBASIC5.81□□□□□ -1.48
SCN4AP35499 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN4AP35499 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN4AP35499 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN4AP35499 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SCN4AP35499 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SCN4AP35499 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.8□□□□□ -1.48
SCN4AP35499 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SCN4AP35499 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SCN4AP35499 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SCN4AP35499 RNA5SP223-201ENST00000365174 120 ntBASIC5.8□□□□□ -1.48
SCN4AP35499 TBCAP2-201ENST00000416175 326 ntBASIC5.8□□□□□ -1.48
SCN4AP35499 AL645608.4-201ENST00000423619 154 ntBASIC5.8□□□□□ -1.48
SCN4AP35499 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.8□□□□□ -1.48
SCN4AP35499 NPM1P18-201ENST00000434232 732 ntBASIC5.8□□□□□ -1.48
SCN4AP35499 OR4C10P-201ENST00000434991 931 ntBASIC5.8□□□□□ -1.48
SCN4AP35499 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.8□□□□□ -1.48
SCN4AP35499 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.8□□□□□ -1.48
SCN4AP35499 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.8□□□□□ -1.48
SCN4AP35499 AL035461.2-201ENST00000619201 524 ntBASIC5.8□□□□□ -1.48
SCN4AP35499 MIR492-201ENST00000638676 116 ntBASIC5.8□□□□□ -1.48
SCN4AP35499 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCN4AP35499 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCN4AP35499 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCN4AP35499 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.8□□□□□ -1.48
SCN4AP35499 AC002525.1-201ENST00000624392 1622 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 AC092681.1-201ENST00000297369 291 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 SNORA5.1-201ENST00000384275 131 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 AC097523.2-201ENST00000435551 652 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 ACTR3P2-201ENST00000439585 1257 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 AL162591.2-201ENST00000449634 317 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 AL691482.1-201ENST00000453255 87 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 TAAR4P-201ENST00000454843 1039 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 SETP4-201ENST00000455717 868 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 MIR6839-201ENST00000620425 113 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 AC087821.1-201ENST00000623639 567 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.79□□□□□ -1.48
SCN4AP35499 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SCN4AP35499 RAD17P1-201ENST00000418130 2042 ntBASIC5.79□□□□□ -1.48
SCN4AP35499 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SCN4AP35499 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SCN4AP35499 AC004076.2-201ENST00000620532 3323 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms