Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ENPP7P11-201ENST00000505915 627 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.16□□□□□ -1.74
COL8A2P25067 RNU6-964P-201ENST00000516524 69 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.16□□□□□ -1.74
COL8A2P25067 AC008147.3-201ENST00000548666 354 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.16□□□□□ -1.74
COL8A2P25067 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.16□□□□□ -1.74
COL8A2P25067 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.16□□□□□ -1.74
COL8A2P25067 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.16□□□□□ -1.74
COL8A2P25067 AC040958.1-201ENST00000561102 201 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AC011453.2-201ENST00000603737 729 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AL034374.2-201ENST00000605281 548 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL8A2P25067 AC019206.1-201ENST00000621938 425 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.16□□□□□ -1.74
COL8A2P25067 SDAD1P1-202ENST00000524156 2051 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AC005005.4-201ENST00000623789 16698 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
COL8A2P25067 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL8A2P25067 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL8A2P25067 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.16□□□□□ -1.74
COL8A2P25067 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.16□□□□□ -1.74
COL8A2P25067 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL8A2P25067 AC133552.1-201ENST00000569988 4007 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL8A2P25067 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL8A2P25067 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.15□□□□□ -1.74
COL8A2P25067 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
COL8A2P25067 AL672167.1-203ENST00000641299 2975 ntBASIC4.15□□□□□ -1.74
COL8A2P25067 AC100778.3-201ENST00000580060 1750 ntBASIC4.15□□□□□ -1.74
COL8A2P25067 AL672167.1-204ENST00000641875 3017 ntBASIC4.15□□□□□ -1.74
COL8A2P25067 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL8A2P25067 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL8A2P25067 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.15□□□□□ -1.75
COL8A2P25067 LRRC37BP1-201ENST00000398851 714 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 NACAP7-201ENST00000407371 609 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 COX5BP7-201ENST00000414780 274 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 PCNPP4-201ENST00000414817 517 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 AC004074.1-201ENST00000421810 1063 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.15□□□□□ -1.75
COL8A2P25067 AC007559.1-201ENST00000428736 355 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 FTLP19-201ENST00000433300 394 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.15□□□□□ -1.75
COL8A2P25067 CEACAMP9-201ENST00000442990 513 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.15□□□□□ -1.75
COL8A2P25067 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.15□□□□□ -1.75
COL8A2P25067 AL691482.1-201ENST00000453255 87 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.15□□□□□ -1.75
COL8A2P25067 RNA5SP228-201ENST00000516232 133 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.15□□□□□ -1.75
COL8A2P25067 AL512310.9-201ENST00000553311 948 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.15□□□□□ -1.75
COL8A2P25067 UBE2FP2-201ENST00000566646 462 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.15□□□□□ -1.75
COL8A2P25067 MIR4270-201ENST00000581799 70 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 AC007497.1-201ENST00000610421 561 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 MIR6820-201ENST00000611508 62 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 AL049794.2-201ENST00000616301 365 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.15□□□□□ -1.75
COL8A2P25067 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.15□□□□□ -1.75
COL8A2P25067 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL8A2P25067 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.15□□□□□ -1.75
COL8A2P25067 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL8A2P25067 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.15□□□□□ -1.75
COL8A2P25067 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
COL8A2P25067 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL8A2P25067 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.15□□□□□ -1.75
COL8A2P25067 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL8A2P25067 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL8A2P25067 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.15□□□□□ -1.75
COL8A2P25067 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL8A2P25067 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL8A2P25067 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.14□□□□□ -1.75
COL8A2P25067 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
COL8A2P25067 RNA5SP443-201ENST00000363083 132 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 SNORA56-201ENST00000383966 129 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 RPL10P10-201ENST00000403509 664 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 RPL26P29-201ENST00000415623 438 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 QRSL1P2-201ENST00000418582 964 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.14□□□□□ -1.75
COL8A2P25067 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.14□□□□□ -1.75
COL8A2P25067 AC093414.1-201ENST00000434712 514 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.14□□□□□ -1.75
COL8A2P25067 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.14□□□□□ -1.75
COL8A2P25067 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL8A2P25067 AL157385.1-201ENST00000446973 268 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 OR1H1P-201ENST00000448731 937 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 AC010733.1-201ENST00000451515 401 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 AC021660.1-201ENST00000465006 554 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 RPS29P22-201ENST00000472363 168 ntBASIC4.14□□□□□ -1.75
COL8A2P25067 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL8A2P25067 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.14□□□□□ -1.75
COL8A2P25067 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms