Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL353898.1-201ENST00000444055 238 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 CLIC4P1-201ENST00000453177 535 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AL354710.1-201ENST00000453641 246 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 RNU6-775P-201ENST00000459318 96 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC110749.1-201ENST00000462007 357 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 UBA52P7-201ENST00000486088 380 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 PGAM1P13-201ENST00000507497 754 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 RFPL4AP5-201ENST00000514977 504 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 RNU6-491P-201ENST00000516099 110 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC074029.2-201ENST00000551045 634 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC004825.1-201ENST00000555068 586 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AL390334.1-201ENST00000556395 450 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC022884.2-201ENST00000578535 580 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AL512329.2-201ENST00000607350 548 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC084036.1-201ENST00000609190 508 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 TMEM30CP-203ENST00000637814 1035 ntBASIC5.26□□□□□ -1.57
HLA-DPA1P20036 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DPA1P20036 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 CR788268.1-201ENST00000603931 1809 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AMZ2P2-201ENST00000406819 1057 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 RN7SKP222-201ENST00000410651 315 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 NPM1P40-201ENST00000412758 733 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 Z68694.1-201ENST00000413929 841 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 RPS4XP16-201ENST00000427198 791 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 RPL5P25-201ENST00000441148 775 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 MORF4L1P4-201ENST00000450245 976 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC090602.1-201ENST00000469695 252 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 RPS4XP1-201ENST00000482189 787 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 RPS21P4-201ENST00000487122 248 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC021087.2-201ENST00000504656 1203 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC024558.1-201ENST00000505008 528 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC108471.1-201ENST00000513977 287 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC024940.3-201ENST00000538551 316 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC006363.1-201ENST00000603806 463 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC073111.2-201ENST00000605657 1075 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC002525.1-201ENST00000624392 1622 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DPA1P20036 AC009313.2-201ENST00000417893 1941 ntBASIC5.25□□□□□ -1.57
HLA-DPA1P20036 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DPA1P20036 AC007618.1-201ENST00000366455 732 ntBASIC5.24□□□□□ -1.57
HLA-DPA1P20036 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms