Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGA1P17096 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGA1P17096 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HMGA1P17096 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HMGA1P17096 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGA1P17096 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HMGA1P17096 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGA1P17096 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGA1P17096 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGA1P17096 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGA1P17096 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HMGA1P17096 SNORA5.1-201ENST00000384275 131 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HMGA1P17096 GLUD1P9-201ENST00000420997 1173 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.98□□□□□ -1.61
HMGA1P17096 RPL23AP1-201ENST00000428990 471 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 AC016712.1-201ENST00000431088 378 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 MRPS21P3-201ENST00000436696 262 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 CYCSP24-201ENST00000445119 316 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGA1P17096 AK3P4-201ENST00000504283 583 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 SNORA26.10-201ENST00000516427 141 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 AC105031.1-201ENST00000518550 476 ntBASIC4.98□□□□□ -1.61
HMGA1P17096 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGA1P17096 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HMGA1P17096 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGA1P17096 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGA1P17096 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGA1P17096 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGA1P17096 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGA1P17096 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGA1P17096 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGA1P17096 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGA1P17096 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HMGA1P17096 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGA1P17096 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGA1P17096 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
HMGA1P17096 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGA1P17096 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HMGA1P17096 AC025574.1-201ENST00000554784 1653 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 SOCS5P3-201ENST00000425115 1576 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGA1P17096 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGA1P17096 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HMGA1P17096 RNA5SP397-201ENST00000391323 118 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 MORF4L1P4-201ENST00000450245 976 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGA1P17096 AC079168.2-201ENST00000453977 416 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGA1P17096 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGA1P17096 AC108043.1-201ENST00000512696 574 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGA1P17096 AC005868.1-201ENST00000536421 331 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGA1P17096 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGA1P17096 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
HMGA1P17096 RN7SL652P-201ENST00000577769 300 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 MIR4715-201ENST00000584117 79 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGA1P17096 AP000648.2-201ENST00000624182 404 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 AC006453.5-201ENST00000636451 619 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGA1P17096 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGA1P17096 ADAM5-202ENST00000399789 1942 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGA1P17096 AC002525.1-201ENST00000624392 1622 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HMGA1P17096 KARSP3-201ENST00000571212 1504 ntBASIC4.97□□□□□ -1.61
HMGA1P17096 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.96□□□□□ -1.61
HMGA1P17096 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGA1P17096 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HMGA1P17096 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HMGA1P17096 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGA1P17096 AL591848.1-201ENST00000413092 322 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 AC140479.3-201ENST00000418944 1126 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 AC006065.1-201ENST00000422539 802 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 CENPIP1-201ENST00000425713 902 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 RPL35AP21-201ENST00000437667 333 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGA1P17096 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGA1P17096 AC108463.1-201ENST00000450258 347 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGA1P17096 AC245028.2-201ENST00000458673 253 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGA1P17096 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGA1P17096 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGA1P17096 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGA1P17096 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HMGA1P17096 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGA1P17096 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGA1P17096 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGA1P17096 AC020915.5-201ENST00000596836 964 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGA1P17096 AC105105.5-201ENST00000622635 1294 ntBASIC4.96□□□□□ -1.62
HMGA1P17096 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGA1P17096 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGA1P17096 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HMGA1P17096 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms