Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL11A1P12107 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.43□□□□□ -1.54
COL11A1P12107 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.43□□□□□ -1.54
COL11A1P12107 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
COL11A1P12107 SNORA71.2-201ENST00000364941 134 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 MIR129-1-201ENST00000384972 72 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 AC079809.1-201ENST00000415468 276 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 RPS3AP54-201ENST00000435535 734 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 MTCYBP21-201ENST00000443300 1113 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 OR11I1P-201ENST00000486033 954 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 RN7SKP122-201ENST00000515923 296 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 AP002981.1-201ENST00000517692 975 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL11A1P12107 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.43□□□□□ -1.54
COL11A1P12107 RN7SL652P-201ENST00000577769 300 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 AC092653.1-201ENST00000608509 531 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.43□□□□□ -1.54
COL11A1P12107 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL11A1P12107 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.43□□□□□ -1.54
COL11A1P12107 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL11A1P12107 AC239868.2-201ENST00000564237 4527 ntBASIC5.43□□□□□ -1.54
COL11A1P12107 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.42□□□□□ -1.54
COL11A1P12107 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
COL11A1P12107 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL11A1P12107 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
COL11A1P12107 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL11A1P12107 MIR659-201ENST00000384963 97 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 OR1F12-201ENST00000402365 945 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 AC140479.3-201ENST00000418944 1126 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 CYCSP24-201ENST00000445119 316 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 AC026402.1-201ENST00000513642 170 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 AC097486.1-201ENST00000515331 210 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.42□□□□□ -1.54
COL11A1P12107 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.42□□□□□ -1.54
COL11A1P12107 AC068724.3-201ENST00000625906 87 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
COL11A1P12107 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL11A1P12107 AC135352.1-201ENST00000506173 1418 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
COL11A1P12107 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.42□□□□□ -1.54
COL11A1P12107 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL11A1P12107 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.42□□□□□ -1.54
COL11A1P12107 AL121950.1-201ENST00000624993 2077 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL11A1P12107 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.42□□□□□ -1.54
COL11A1P12107 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL11A1P12107 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.42□□□□□ -1.54
COL11A1P12107 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.42□□□□□ -1.54
COL11A1P12107 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL11A1P12107 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL11A1P12107 AP000580.1-201ENST00000404439 358 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.41□□□□□ -1.54
COL11A1P12107 RPL12P34-201ENST00000424532 479 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC234779.1-201ENST00000425910 285 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.41□□□□□ -1.54
COL11A1P12107 AL451139.1-201ENST00000434718 346 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 NPM1P33-201ENST00000438918 872 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC093840.1-201ENST00000511599 336 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.41□□□□□ -1.54
COL11A1P12107 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL11A1P12107 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.41□□□□□ -1.54
COL11A1P12107 SNORA74C-1-201ENST00000580726 201 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL11A1P12107 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC002525.1-201ENST00000624392 1622 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL11A1P12107 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
COL11A1P12107 AP001029.2-203ENST00000589795 4910 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL11A1P12107 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 MIR298-201ENST00000401212 88 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 GTF2IP2-201ENST00000424290 697 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 RPEP3-201ENST00000425462 676 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC004975.1-201ENST00000428733 208 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 RN7SL517P-201ENST00000462240 305 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 RPL36AP41-201ENST00000493820 306 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 MYL12BP2-201ENST00000503948 512 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.41□□□□□ -1.54
COL11A1P12107 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.41□□□□□ -1.54
COL11A1P12107 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.41□□□□□ -1.54
COL11A1P12107 AC068831.4-201ENST00000556118 109 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.41□□□□□ -1.54
COL11A1P12107 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.41□□□□□ -1.54
COL11A1P12107 CYCSP40-201ENST00000575927 294 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.41□□□□□ -1.54
COL11A1P12107 AC073091.2-201ENST00000603205 907 ntBASIC5.41□□□□□ -1.54
COL11A1P12107 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.41□□□□□ -1.54
COL11A1P12107 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.41□□□□□ -1.54
COL11A1P12107 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL11A1P12107 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL11A1P12107 AC092376.2-201ENST00000622621 4116 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 AC005831.1-201ENST00000624384 1697 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
COL11A1P12107 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL11A1P12107 AL034370.1-201ENST00000397254 1590 ntBASIC5.4□□□□□ -1.54
COL11A1P12107 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL11A1P12107 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL11A1P12107 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL11A1P12107 AL591848.1-201ENST00000413092 322 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms