Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CSB-PGBD3P0DP91 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 METTL21EP-201ENST00000298105 713 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 U3.28-201ENST00000391249 210 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AP000357.1-201ENST00000409926 1165 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AL121776.1-201ENST00000429337 372 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC016908.1-201ENST00000442571 1219 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 HMGB1P48-201ENST00000446155 598 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC109458.1-201ENST00000508858 316 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC079140.3-201ENST00000511111 550 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 OR8Q1P-201ENST00000526467 655 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC092325.1-201ENST00000566449 554 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC087683.1-201ENST00000591187 441 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 RNU6-84P-201ENST00000607737 102 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 RNA5SP440-201ENST00000612665 119 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC008498.1-201ENST00000613012 531 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC095031.1-201ENST00000623685 672 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 MAPK10-383ENST00000642032 3390 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC106872.5-201ENST00000508856 1416 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 MTND5P23-201ENST00000430812 1655 ntBASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.27□□□□□ -1.09
CSB-PGBD3P0DP91 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC011455.2-201ENST00000599320 3336 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AL079342.2-201ENST00000403367 482 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AL354890.1-201ENST00000413730 346 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 YWHAEP5-201ENST00000431545 765 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 CLUHP1-201ENST00000435012 1190 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC122718.1-201ENST00000439448 744 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC002542.1-201ENST00000440683 193 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 MTND3P10-201ENST00000450967 341 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 PSMC1P13-201ENST00000458195 985 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 FAM133DP-201ENST00000464802 691 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC069304.1-201ENST00000491593 704 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 MIR5708-201ENST00000579723 85 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AP001542.2-201ENST00000593141 364 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 BNIP3P33-201ENST00000598912 569 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC078795.3-201ENST00000602913 472 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 CLPTM1LP1-201ENST00000604519 484 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC004067.1-201ENST00000608733 700 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC092954.2-201ENST00000609103 430 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 MIR6809-201ENST00000612189 116 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC138932.5-201ENST00000617759 563 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 AC009237.3-203ENST00000442128 3551 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 SEC63P2-201ENST00000503863 1939 ntBASIC8.26□□□□□ -1.09
CSB-PGBD3P0DP91 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms