Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 IMMP1LP1-201ENST00000605170 488 ntBASIC5.44□□□□□ -1.54
TPM1P09493 AC067838.1-201ENST00000606064 577 ntBASIC5.44□□□□□ -1.54
TPM1P09493 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.44□□□□□ -1.54
TPM1P09493 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.44□□□□□ -1.54
TPM1P09493 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 AC235565.1-201ENST00000456962 1325 ntBASIC5.44□□□□□ -1.54
TPM1P09493 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.44□□□□□ -1.54
TPM1P09493 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM1P09493 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM1P09493 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM1P09493 AL391422.1-201ENST00000402155 436 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AL589994.1-201ENST00000404962 340 ntBASIC5.43□□□□□ -1.54
TPM1P09493 SNORA77-201ENST00000408716 125 ntBASIC5.43□□□□□ -1.54
TPM1P09493 RNA5SP146-201ENST00000410743 123 ntBASIC5.43□□□□□ -1.54
TPM1P09493 RPL21P108-201ENST00000413857 481 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM1P09493 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM1P09493 AC004690.1-201ENST00000418216 328 ntBASIC5.43□□□□□ -1.54
TPM1P09493 FABP7P1-201ENST00000424004 391 ntBASIC5.43□□□□□ -1.54
TPM1P09493 EIF4HP2-201ENST00000424380 563 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM1P09493 HMGN1P36-201ENST00000446623 298 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AL354714.3-201ENST00000447284 493 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM1P09493 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM1P09493 AC005008.1-201ENST00000456151 612 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM1P09493 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.43□□□□□ -1.54
TPM1P09493 RN7SL547P-201ENST00000490793 290 ntBASIC5.43□□□□□ -1.54
TPM1P09493 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM1P09493 AC015864.1-201ENST00000496512 544 ntBASIC5.43□□□□□ -1.54
TPM1P09493 STMN1P2-201ENST00000508435 439 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.43□□□□□ -1.54
TPM1P09493 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM1P09493 AP002981.1-201ENST00000517692 975 ntBASIC5.43□□□□□ -1.54
TPM1P09493 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.43□□□□□ -1.54
TPM1P09493 GSTP1P1-201ENST00000548078 319 ntBASIC5.43□□□□□ -1.54
TPM1P09493 DUX4L52-201ENST00000549363 777 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AC126177.5-201ENST00000549599 178 ntBASIC5.43□□□□□ -1.54
TPM1P09493 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM1P09493 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM1P09493 AL008729.2-201ENST00000606393 473 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AL049794.2-201ENST00000616301 365 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AL158062.1-201ENST00000619632 745 ntBASIC5.43□□□□□ -1.54
TPM1P09493 AC012414.7-202ENST00000622705 1090 ntBASIC5.43□□□□□ -1.54
TPM1P09493 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.43□□□□□ -1.54
TPM1P09493 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TPM1P09493 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TPM1P09493 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TPM1P09493 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.42□□□□□ -1.54
TPM1P09493 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.42□□□□□ -1.54
TPM1P09493 OR51A6P-201ENST00000418680 1004 ntBASIC5.42□□□□□ -1.54
TPM1P09493 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.42□□□□□ -1.54
TPM1P09493 RPL23AP19-201ENST00000436229 369 ntBASIC5.42□□□□□ -1.54
TPM1P09493 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.42□□□□□ -1.54
TPM1P09493 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.42□□□□□ -1.54
TPM1P09493 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TPM1P09493 DEFB109F-201ENST00000491870 277 ntBASIC5.42□□□□□ -1.54
TPM1P09493 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.42□□□□□ -1.54
TPM1P09493 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.42□□□□□ -1.54
TPM1P09493 AC022826.1-201ENST00000519383 805 ntBASIC5.42□□□□□ -1.54
TPM1P09493 AC012339.2-201ENST00000523996 453 ntBASIC5.42□□□□□ -1.54
TPM1P09493 AC134349.2-201ENST00000535136 910 ntBASIC5.42□□□□□ -1.54
TPM1P09493 AC022404.1-201ENST00000555320 273 ntBASIC5.42□□□□□ -1.54
TPM1P09493 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.42□□□□□ -1.54
TPM1P09493 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.42□□□□□ -1.54
TPM1P09493 AC104687.2-201ENST00000604442 342 ntBASIC5.42□□□□□ -1.54
TPM1P09493 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.42□□□□□ -1.54
TPM1P09493 AC019206.1-201ENST00000621938 425 ntBASIC5.42□□□□□ -1.54
TPM1P09493 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
TPM1P09493 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.42□□□□□ -1.54
TPM1P09493 AC108751.5-201ENST00000492880 1336 ntBASIC5.42□□□□□ -1.54
TPM1P09493 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TPM1P09493 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TPM1P09493 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TPM1P09493 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TPM1P09493 AC009643.2-201ENST00000603543 1448 ntBASIC5.41□□□□□ -1.54
TPM1P09493 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TPM1P09493 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TPM1P09493 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TPM1P09493 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.41□□□□□ -1.54
TPM1P09493 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TPM1P09493 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TPM1P09493 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TPM1P09493 RN7SKP104-201ENST00000362605 328 ntBASIC5.41□□□□□ -1.54
TPM1P09493 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TPM1P09493 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TPM1P09493 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms