Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDGFAP04085 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDGFAP04085 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PDGFAP04085 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.7□□□□□ -1.34
PDGFAP04085 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
PDGFAP04085 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PDGFAP04085 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
PDGFAP04085 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 AL512646.1-201ENST00000269395 1077 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 SNRPEP3-201ENST00000338402 276 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PDGFAP04085 Y_RNA.160-201ENST00000363677 92 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 RNU6-809P-201ENST00000384461 107 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 MIR99A-201ENST00000384906 81 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 EEF1GP7-201ENST00000422983 703 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 MTCO1P20-201ENST00000425366 358 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.69□□□□□ -1.34
PDGFAP04085 AL358934.1-201ENST00000432346 324 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 MTND6P13-201ENST00000443510 523 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.69□□□□□ -1.34
PDGFAP04085 AC135721.2-201ENST00000464237 300 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.69□□□□□ -1.34
PDGFAP04085 AC092757.1-201ENST00000467293 467 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC017015.1-201ENST00000477387 286 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 RPS3AP14-201ENST00000483907 780 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC091544.1-201ENST00000484702 348 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC026412.2-201ENST00000512270 1075 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.69□□□□□ -1.34
PDGFAP04085 OR52H2P-201ENST00000514607 902 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.69□□□□□ -1.34
PDGFAP04085 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.69□□□□□ -1.34
PDGFAP04085 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.69□□□□□ -1.34
PDGFAP04085 AC024405.1-201ENST00000532521 1042 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 AL390334.1-201ENST00000556395 450 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 AC010287.1-201ENST00000566916 357 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.69□□□□□ -1.34
PDGFAP04085 AC024267.2-201ENST00000582737 417 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 MIR4307-201ENST00000582802 84 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 MIR4428-201ENST00000584884 73 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 RPS27AP19-201ENST00000597285 458 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC011891.2-201ENST00000604949 397 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC097468.3-201ENST00000607956 456 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC007038.2-201ENST00000608095 740 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.69□□□□□ -1.34
PDGFAP04085 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.69□□□□□ -1.34
PDGFAP04085 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 AC110994.2-201ENST00000635481 492 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.69□□□□□ -1.34
PDGFAP04085 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.69□□□□□ -1.34
PDGFAP04085 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.69□□□□□ -1.34
PDGFAP04085 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PDGFAP04085 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
PDGFAP04085 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 AC090017.1-201ENST00000548612 1779 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.69□□□□□ -1.34
PDGFAP04085 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 AC006378.2-201ENST00000623178 2476 ntBASIC6.69□□□□□ -1.34
PDGFAP04085 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PDGFAP04085 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.68□□□□□ -1.34
PDGFAP04085 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 AL359195.2-201ENST00000623657 4412 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PDGFAP04085 AC008957.3-201ENST00000624112 2242 ntBASIC6.68□□□□□ -1.34
PDGFAP04085 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.68□□□□□ -1.34
PDGFAP04085 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms