Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.01□□□□□ -1.61
NKX2-2O95096 HMGN1P9-201ENST00000515212 298 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 RN7SKP157-201ENST00000516174 282 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC027544.3-201ENST00000535082 757 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC000068.2-201ENST00000608816 460 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC109583.2-201ENST00000617367 129 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AP003400.3-201ENST00000624904 346 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC004808.1-201ENST00000627671 721 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC099654.6-201ENST00000636487 512 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
NKX2-2O95096 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NKX2-2O95096 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-2O95096 HSPA8P17-201ENST00000427029 1382 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
NKX2-2O95096 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
NKX2-2O95096 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
NKX2-2O95096 MAX-203ENST00000341653 330 ntTSL 2 BASIC5□□□□□ -1.61
NKX2-2O95096 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 RNU6-207P-201ENST00000384137 107 ntBASIC5□□□□□ -1.61
NKX2-2O95096 RNU6-225P-201ENST00000384613 103 ntBASIC5□□□□□ -1.61
NKX2-2O95096 MIR142-201ENST00000384835 87 ntBASIC5□□□□□ -1.61
NKX2-2O95096 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NKX2-2O95096 RPL7AP49-201ENST00000429522 581 ntBASIC5□□□□□ -1.61
NKX2-2O95096 ETF1P3-201ENST00000430422 1160 ntBASIC5□□□□□ -1.61
NKX2-2O95096 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-2O95096 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 AL591438.1-201ENST00000433508 581 ntBASIC5□□□□□ -1.61
NKX2-2O95096 GAPDHP25-201ENST00000447061 1001 ntBASIC5□□□□□ -1.61
NKX2-2O95096 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 RPS24P16-201ENST00000497294 392 ntBASIC5□□□□□ -1.61
NKX2-2O95096 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5□□□□□ -1.61
NKX2-2O95096 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-2O95096 AC093890.1-201ENST00000502554 540 ntBASIC5□□□□□ -1.61
NKX2-2O95096 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-2O95096 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5□□□□□ -1.61
NKX2-2O95096 CDC42P3-201ENST00000518493 633 ntBASIC5□□□□□ -1.61
NKX2-2O95096 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5□□□□□ -1.61
NKX2-2O95096 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5□□□□□ -1.61
NKX2-2O95096 AP004607.2-201ENST00000533949 322 ntBASIC5□□□□□ -1.61
NKX2-2O95096 AC087894.1-201ENST00000538359 518 ntBASIC5□□□□□ -1.61
NKX2-2O95096 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 AP003717.3-201ENST00000544832 1180 ntBASIC5□□□□□ -1.61
NKX2-2O95096 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-2O95096 AC125612.1-201ENST00000547580 377 ntBASIC5□□□□□ -1.61
NKX2-2O95096 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 AC018552.1-201ENST00000562099 811 ntBASIC5□□□□□ -1.61
NKX2-2O95096 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5□□□□□ -1.61
NKX2-2O95096 AC005341.1-201ENST00000571086 708 ntBASIC5□□□□□ -1.61
NKX2-2O95096 AC090666.1-201ENST00000578241 445 ntBASIC5□□□□□ -1.61
NKX2-2O95096 AC008507.2-201ENST00000588402 1176 ntBASIC5□□□□□ -1.61
NKX2-2O95096 AC012254.4-201ENST00000588843 273 ntBASIC5□□□□□ -1.61
NKX2-2O95096 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-2O95096 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 AL158050.2-201ENST00000605336 568 ntBASIC5□□□□□ -1.61
NKX2-2O95096 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5□□□□□ -1.61
NKX2-2O95096 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NKX2-2O95096 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-2O95096 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
NKX2-2O95096 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 MTCO1P18-201ENST00000455518 1419 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 ADAM24P-201ENST00000398655 2101 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms