Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
USH2AO75445 AL031651.1-201ENST00000615357 1438 ntBASIC2.09□□□□□ -2.08
USH2AO75445 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
USH2AO75445 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
USH2AO75445 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
USH2AO75445 NAP1L4P1-201ENST00000319092 1157 ntBASIC2.09□□□□□ -2.08
USH2AO75445 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.09□□□□□ -2.08
USH2AO75445 AL136231.1-201ENST00000429407 730 ntBASIC2.09□□□□□ -2.08
USH2AO75445 MRPS21P3-201ENST00000436696 262 ntBASIC2.09□□□□□ -2.08
USH2AO75445 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC2.09□□□□□ -2.08
USH2AO75445 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC2.09□□□□□ -2.08
USH2AO75445 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.09□□□□□ -2.08
USH2AO75445 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC2.09□□□□□ -2.08
USH2AO75445 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC2.09□□□□□ -2.08
USH2AO75445 AC012314.7-201ENST00000619693 93 ntBASIC2.09□□□□□ -2.08
USH2AO75445 AL672167.1-203ENST00000641299 2975 ntBASIC2.09□□□□□ -2.08
USH2AO75445 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC2.09□□□□□ -2.08
USH2AO75445 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
USH2AO75445 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
USH2AO75445 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
USH2AO75445 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
USH2AO75445 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 AC004924.1-201ENST00000480160 781 ntBASIC2.08□□□□□ -2.08
USH2AO75445 MIR7111-201ENST00000619751 72 ntBASIC2.08□□□□□ -2.08
USH2AO75445 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 AC008758.3-201ENST00000507003 1829 ntBASIC2.08□□□□□ -2.08
USH2AO75445 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 WBP11P1-201ENST00000562560 1931 ntBASIC2.08□□□□□ -2.08
USH2AO75445 MT-RNR1-201ENST00000389680 954 ntBASIC2.08□□□□□ -2.08
USH2AO75445 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 OR6C71P-201ENST00000432580 913 ntBASIC2.08□□□□□ -2.08
USH2AO75445 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
USH2AO75445 F11-205ENST00000492972 1204 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC2.08□□□□□ -2.08
USH2AO75445 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 AC104984.5-201ENST00000586878 94 ntBASIC2.08□□□□□ -2.08
USH2AO75445 AC013731.1-201ENST00000604340 883 ntBASIC2.08□□□□□ -2.08
USH2AO75445 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
USH2AO75445 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 LARP1BP1-201ENST00000506036 1359 ntBASIC2.08□□□□□ -2.08
USH2AO75445 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 SNORD1C-201ENST00000363315 78 ntBASIC2.08□□□□□ -2.08
USH2AO75445 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
USH2AO75445 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC2.08□□□□□ -2.08
USH2AO75445 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC2.08□□□□□ -2.08
USH2AO75445 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 AC079880.2-201ENST00000603790 1213 ntBASIC2.08□□□□□ -2.08
USH2AO75445 AL353729.2-201ENST00000605859 1249 ntBASIC2.08□□□□□ -2.08
USH2AO75445 AC019176.2-201ENST00000611579 315 ntBASIC2.08□□□□□ -2.08
USH2AO75445 AC140113.4-201ENST00000622087 222 ntBASIC2.08□□□□□ -2.08
USH2AO75445 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 ZNF137P-201ENST00000456718 1920 ntBASIC2.08□□□□□ -2.08
USH2AO75445 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC2.08□□□□□ -2.08
USH2AO75445 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
USH2AO75445 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC2.08□□□□□ -2.08
USH2AO75445 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms