Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CLDN3O15551 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN3O15551 RN7SKP95-201ENST00000362860 303 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 SNORA51.8-201ENST00000384234 132 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 AL136116.2-201ENST00000404020 785 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN3O15551 CHEK2P3-201ENST00000416118 248 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 GNG5P5-201ENST00000420444 220 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.46□□□□□ -1.54
CLDN3O15551 RPS27P18-201ENST00000431701 247 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 PRPF38AP2-201ENST00000438179 851 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 AP000926.3-201ENST00000497201 299 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN3O15551 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.46□□□□□ -1.54
CLDN3O15551 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.46□□□□□ -1.54
CLDN3O15551 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.46□□□□□ -1.54
CLDN3O15551 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.46□□□□□ -1.54
CLDN3O15551 AC005377.1-201ENST00000605126 456 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN3O15551 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
CLDN3O15551 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN3O15551 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN3O15551 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN3O15551 AC104623.2-202ENST00000623477 4002 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN3O15551 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.46□□□□□ -1.54
CLDN3O15551 Z95331.1-201ENST00000623075 23112 ntBASIC5.46□□□□□ -1.54
CLDN3O15551 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN3O15551 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN3O15551 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CLDN3O15551 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN3O15551 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN3O15551 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN3O15551 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN3O15551 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN3O15551 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLDN3O15551 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CLDN3O15551 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLDN3O15551 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLDN3O15551 RNU6-249P-201ENST00000363016 102 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLDN3O15551 GAPDHP15-201ENST00000398586 975 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AF186996.5-201ENST00000418098 904 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN3O15551 AL450023.3-201ENST00000440592 271 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 SUMO2P1-206ENST00000445436 284 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 OTX2P1-201ENST00000450956 354 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN3O15551 MTND6P32-201ENST00000457611 483 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AC090142.2-201ENST00000483263 416 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 COX6B1P2-201ENST00000489624 230 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN3O15551 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN3O15551 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN3O15551 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN3O15551 AP002981.1-201ENST00000517692 975 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.45□□□□□ -1.54
CLDN3O15551 AP001922.4-201ENST00000526967 290 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.45□□□□□ -1.54
CLDN3O15551 AC005000.1-201ENST00000536192 288 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AC008033.2-201ENST00000542626 177 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN3O15551 AC006349.1-201ENST00000555526 235 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN3O15551 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN3O15551 OR1F2P-201ENST00000570470 933 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN3O15551 AC011840.5-201ENST00000582125 771 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AF117829.2-201ENST00000619538 361 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 AL158062.1-201ENST00000619632 745 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 MIR6730-201ENST00000622213 67 ntBASIC5.45□□□□□ -1.54
CLDN3O15551 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN3O15551 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.45□□□□□ -1.54
CLDN3O15551 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN3O15551 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN3O15551 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN3O15551 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN3O15551 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CLDN3O15551 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN3O15551 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN3O15551 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CLDN3O15551 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CLDN3O15551 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN3O15551 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN3O15551 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN3O15551 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN3O15551 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.44□□□□□ -1.54
CLDN3O15551 MIR550A3-201ENST00000390735 95 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 AC002524.1-201ENST00000411687 547 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 AL590762.4-201ENST00000425885 253 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN3O15551 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN3O15551 UBE2V2P1-201ENST00000434717 398 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 OR6C72P-201ENST00000451403 892 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN3O15551 AL645937.3-201ENST00000453647 936 ntBASIC5.44□□□□□ -1.54
CLDN3O15551 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN3O15551 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms