Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 NUDT19P3-201ENST00000404698 555 ntBASIC4.92□□□□□ -1.62
LSM1O15116 MIR1182-201ENST00000408363 97 ntBASIC4.92□□□□□ -1.62
LSM1O15116 RN7SKP293-201ENST00000411389 296 ntBASIC4.92□□□□□ -1.62
LSM1O15116 ATG4AP1-201ENST00000416893 538 ntBASIC4.92□□□□□ -1.62
LSM1O15116 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.92□□□□□ -1.62
LSM1O15116 AC092570.3-201ENST00000420113 693 ntBASIC4.92□□□□□ -1.62
LSM1O15116 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.92□□□□□ -1.62
LSM1O15116 AC093655.2-201ENST00000425735 631 ntBASIC4.92□□□□□ -1.62
LSM1O15116 FAM96AP1-201ENST00000430879 482 ntBASIC4.92□□□□□ -1.62
LSM1O15116 OR52E7P-201ENST00000452394 933 ntBASIC4.92□□□□□ -1.62
LSM1O15116 Z92846.1-201ENST00000456203 268 ntBASIC4.92□□□□□ -1.62
LSM1O15116 MTND6P32-201ENST00000457611 483 ntBASIC4.92□□□□□ -1.62
LSM1O15116 AC091180.1-201ENST00000462104 372 ntBASIC4.92□□□□□ -1.62
LSM1O15116 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.92□□□□□ -1.62
LSM1O15116 AC073073.1-201ENST00000493920 463 ntBASIC4.92□□□□□ -1.62
LSM1O15116 AC015864.1-201ENST00000496512 544 ntBASIC4.92□□□□□ -1.62
LSM1O15116 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.92□□□□□ -1.62
LSM1O15116 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.92□□□□□ -1.62
LSM1O15116 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.92□□□□□ -1.62
LSM1O15116 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.92□□□□□ -1.62
LSM1O15116 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.92□□□□□ -1.62
LSM1O15116 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 AC069307.1-201ENST00000602820 447 ntBASIC4.92□□□□□ -1.62
LSM1O15116 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.92□□□□□ -1.62
LSM1O15116 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.92□□□□□ -1.62
LSM1O15116 AL589935.2-201ENST00000616471 1231 ntBASIC4.92□□□□□ -1.62
LSM1O15116 AC126175.1-201ENST00000617041 758 ntBASIC4.92□□□□□ -1.62
LSM1O15116 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.92□□□□□ -1.62
LSM1O15116 SAMMSON-209ENST00000641222 1100 ntBASIC4.92□□□□□ -1.62
LSM1O15116 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 AC235565.1-201ENST00000456962 1325 ntBASIC4.92□□□□□ -1.62
LSM1O15116 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.92□□□□□ -1.62
LSM1O15116 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LSM1O15116 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.92□□□□□ -1.62
LSM1O15116 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LSM1O15116 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LSM1O15116 HSPA8P17-201ENST00000427029 1382 ntBASIC4.91□□□□□ -1.62
LSM1O15116 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LSM1O15116 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LSM1O15116 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
LSM1O15116 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LSM1O15116 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LSM1O15116 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
LSM1O15116 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LSM1O15116 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LSM1O15116 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LSM1O15116 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.91□□□□□ -1.62
LSM1O15116 SNORA2.3-201ENST00000383920 135 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AC013442.1-201ENST00000397347 228 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AC013429.2-201ENST00000418798 781 ntBASIC4.91□□□□□ -1.62
LSM1O15116 OR5M12P-201ENST00000423388 929 ntBASIC4.91□□□□□ -1.62
LSM1O15116 RPS12P5-201ENST00000423449 371 ntBASIC4.91□□□□□ -1.62
LSM1O15116 RPS29P14-201ENST00000431518 171 ntBASIC4.91□□□□□ -1.62
LSM1O15116 GAPDHP34-201ENST00000432112 823 ntBASIC4.91□□□□□ -1.62
LSM1O15116 HMGB3P10-201ENST00000434734 572 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.91□□□□□ -1.62
LSM1O15116 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.91□□□□□ -1.62
LSM1O15116 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.91□□□□□ -1.62
LSM1O15116 MTND4LP12-201ENST00000448237 295 ntBASIC4.91□□□□□ -1.62
LSM1O15116 PPIAP19-201ENST00000486414 492 ntBASIC4.91□□□□□ -1.62
LSM1O15116 RN7SL441P-201ENST00000492388 296 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.91□□□□□ -1.62
LSM1O15116 RPS4XP20-201ENST00000505751 772 ntBASIC4.91□□□□□ -1.62
LSM1O15116 UGT2A3P7-201ENST00000510485 734 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LSM1O15116 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.91□□□□□ -1.62
LSM1O15116 NPM1P6-201ENST00000521088 871 ntBASIC4.91□□□□□ -1.62
LSM1O15116 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.91□□□□□ -1.62
LSM1O15116 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.91□□□□□ -1.62
LSM1O15116 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LSM1O15116 AL512310.9-201ENST00000553311 948 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AGGF1P9-201ENST00000561884 913 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.91□□□□□ -1.62
LSM1O15116 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.91□□□□□ -1.62
LSM1O15116 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.91□□□□□ -1.62
LSM1O15116 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.91□□□□□ -1.62
LSM1O15116 AL359513.1-201ENST00000614364 557 ntBASIC4.91□□□□□ -1.62
LSM1O15116 RPSAP73-201ENST00000614820 330 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AC007204.2-201ENST00000615022 616 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AC015914.2-201ENST00000618167 288 ntBASIC4.91□□□□□ -1.62
LSM1O15116 AC005840.5-201ENST00000619166 599 ntBASIC4.91□□□□□ -1.62
LSM1O15116 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.91□□□□□ -1.62
LSM1O15116 BRAFP1-201ENST00000445336 2703 ntBASIC4.91□□□□□ -1.62
LSM1O15116 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LSM1O15116 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LSM1O15116 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.91□□□□□ -1.62
LSM1O15116 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.91□□□□□ -1.62
LSM1O15116 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
LSM1O15116 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.9□□□□□ -1.62
LSM1O15116 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
LSM1O15116 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
LSM1O15116 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LSM1O15116 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.9□□□□□ -1.62
LSM1O15116 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LSM1O15116 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.9□□□□□ -1.62
LSM1O15116 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms