Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.11□□□□□ -1.75
SDCBPO00560 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SDCBPO00560 RNU1-83P-201ENST00000363426 164 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 SNORD96B-201ENST00000386148 79 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 FABP7P1-201ENST00000424004 391 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.11□□□□□ -1.75
SDCBPO00560 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.11□□□□□ -1.75
SDCBPO00560 HSPE1P27-201ENST00000430808 296 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 FTLP19-201ENST00000433300 394 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.11□□□□□ -1.75
SDCBPO00560 AC004938.1-201ENST00000438468 308 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 NPM1P33-201ENST00000438918 872 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 OR7E125P-201ENST00000443450 846 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SDCBPO00560 RN7SL517P-201ENST00000462240 305 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 SNRPCP2-201ENST00000504370 475 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 COX6B1P5-201ENST00000509843 249 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SDCBPO00560 OR7E128P-201ENST00000532736 1024 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.11□□□□□ -1.75
SDCBPO00560 AC092490.3-201ENST00000545370 572 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SDCBPO00560 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.11□□□□□ -1.75
SDCBPO00560 MIR1269B-201ENST00000580405 75 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.11□□□□□ -1.75
SDCBPO00560 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.11□□□□□ -1.75
SDCBPO00560 SNORD91B-202ENST00000608459 222 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 AC022467.1-201ENST00000614738 749 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.11□□□□□ -1.75
SDCBPO00560 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.11□□□□□ -1.75
SDCBPO00560 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SDCBPO00560 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.11□□□□□ -1.75
SDCBPO00560 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SDCBPO00560 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SDCBPO00560 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.11□□□□□ -1.75
SDCBPO00560 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SDCBPO00560 MTCO1P11-201ENST00000429111 1528 ntBASIC4.11□□□□□ -1.75
SDCBPO00560 ECM1P2-201ENST00000503354 1577 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.1□□□□□ -1.75
SDCBPO00560 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SDCBPO00560 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SDCBPO00560 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SDCBPO00560 SNURFL-201ENST00000309296 343 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 RPL23P2-201ENST00000320371 421 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 RNA5SP455-201ENST00000365190 119 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SDCBPO00560 Z97832.1-201ENST00000402490 328 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 AL136116.2-201ENST00000404020 785 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 U3.36-201ENST00000408418 213 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 RN7SKP199-201ENST00000410325 305 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.1□□□□□ -1.75
SDCBPO00560 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SDCBPO00560 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.1□□□□□ -1.75
SDCBPO00560 AL355433.1-201ENST00000422804 300 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 MRPL48P1-201ENST00000445390 636 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.1□□□□□ -1.75
SDCBPO00560 NDUFA5P8-201ENST00000449019 346 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.1□□□□□ -1.75
SDCBPO00560 RN7SL222P-201ENST00000476452 299 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 GOLGA5P1-201ENST00000507317 980 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.1□□□□□ -1.75
SDCBPO00560 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.1□□□□□ -1.75
SDCBPO00560 RNU6-964P-201ENST00000516524 69 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 AC022832.1-201ENST00000530718 645 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.1□□□□□ -1.75
SDCBPO00560 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.1□□□□□ -1.75
SDCBPO00560 OR11J2P-201ENST00000555298 907 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.1□□□□□ -1.75
SDCBPO00560 MIR4489-201ENST00000578869 62 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 MIR3176-201ENST00000582210 90 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.1□□□□□ -1.75
SDCBPO00560 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.1□□□□□ -1.75
SDCBPO00560 SUMO2P15-201ENST00000604285 278 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.1□□□□□ -1.75
SDCBPO00560 AC234782.5-201ENST00000617723 324 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 MIR6826-201ENST00000617808 98 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.1□□□□□ -1.75
SDCBPO00560 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SDCBPO00560 AC108751.5-201ENST00000492880 1336 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SDCBPO00560 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SDCBPO00560 THAP12P4-201ENST00000528321 2266 ntBASIC4.1□□□□□ -1.75
SDCBPO00560 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SDCBPO00560 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.1□□□□□ -1.75
SDCBPO00560 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SDCBPO00560 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SDCBPO00560 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.09□□□□□ -1.75
SDCBPO00560 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.09□□□□□ -1.75
SDCBPO00560 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SDCBPO00560 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SDCBPO00560 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.09□□□□□ -1.75
SDCBPO00560 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SDCBPO00560 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SDCBPO00560 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.09□□□□□ -1.75
SDCBPO00560 AL445213.1-201ENST00000412589 747 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.09□□□□□ -1.75
SDCBPO00560 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.09□□□□□ -1.75
SDCBPO00560 CNOT7P2-201ENST00000441051 832 ntBASIC4.09□□□□□ -1.75
SDCBPO00560 AL137845.2-201ENST00000444292 988 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms