Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC130352.1-201ENST00000602979 661 ntBASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.84□□□□□ -1.63
NPIPA3F8WFD2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NPIPA3F8WFD2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NPIPA3F8WFD2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NPIPA3F8WFD2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NPIPA3F8WFD2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 UGT2B26P-201ENST00000508672 1613 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 RN7SKP145-201ENST00000363291 303 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AL645733.1-201ENST00000402250 217 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AL136131.1-201ENST00000406079 803 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 RPL23AP4-201ENST00000427757 463 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 XKRY2-201ENST00000442362 1093 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 CALM1P2-201ENST00000452941 448 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 CBX1P5-201ENST00000475330 559 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 RPL7P40-201ENST00000481703 745 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 OR9N1P-202ENST00000494289 481 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 RN7SKP66-201ENST00000516681 231 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC018442.3-201ENST00000523025 183 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 OR4A46P-201ENST00000527255 933 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AP000769.2-201ENST00000602344 396 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC009027.1-201ENST00000604510 479 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC024940.4-201ENST00000605507 246 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC068870.2-201ENST00000620635 389 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 SCARNA15-201ENST00000607520 4325 ntBASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA3F8WFD2 AC114947.2-201ENST00000565748 2125 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AL078621.3-201ENST00000623707 2042 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 SNORD115-48-201ENST00000364764 76 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 RNU1-106P-201ENST00000384382 164 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 RNA5SP296-201ENST00000410523 111 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 RN7SKP126-201ENST00000411143 300 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 RANP4-201ENST00000413361 655 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC093162.1-201ENST00000419682 124 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 RPA2P2-201ENST00000419698 796 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 MTND4P24-201ENST00000424002 397 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC083899.1-201ENST00000454465 3819 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC109462.1-201ENST00000491087 368 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 RPS4XP20-201ENST00000505751 772 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 IGHV3-63-201ENST00000518422 341 ntBASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA3F8WFD2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms