Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SMG1P6-201ENST00000532337 2930 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC010928.1-201ENST00000592477 1447 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 MAPK10-263ENST00000641052 4307 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RNU6-398P-201ENST00000384143 109 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 TRAV35-201ENST00000390462 330 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RPL7P58-201ENST00000402913 758 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RPS16P5-201ENST00000406501 404 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 LINC00993-201ENST00000420453 540 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC092162.1-201ENST00000432828 434 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AL359265.2-201ENST00000434367 631 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RPS17P8-201ENST00000434525 335 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 H2AFZP6-201ENST00000444403 394 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC245028.2-201ENST00000458673 253 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RN7SL738P-201ENST00000470264 297 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RN7SL205P-201ENST00000490174 284 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC104971.1-201ENST00000495117 578 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 MIR5699-201ENST00000578903 90 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RN7SL52P-201ENST00000584271 284 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC068790.7-201ENST00000602347 528 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC098935.2-201ENST00000604222 466 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RN7SL722P-201ENST00000617780 284 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 RN7SL565P-201ENST00000618246 284 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 TLK1P1-201ENST00000456760 2440 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC009643.2-201ENST00000603543 1448 ntBASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMIM28A0A1B0GU29 AC012078.1-201ENST00000405035 1646 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 NCOA4P2-201ENST00000340589 1813 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 RNA5SP505-201ENST00000364748 108 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 MIR298-201ENST00000401212 88 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 SETP9-201ENST00000423837 832 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 CYCSP11-201ENST00000436426 315 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 AL356981.1-201ENST00000454879 684 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 AC010326.1-201ENST00000462726 602 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 AC090589.1-201ENST00000473109 362 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 ENPP7P9-201ENST00000514456 627 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 RNU6-709P-201ENST00000517257 104 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 AC079075.1-201ENST00000559543 878 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 AC234771.5-201ENST00000600161 514 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 MUC2-202ENST00000613187 4845 ntBASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM28A0A1B0GU29 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM28A0A1B0GU29 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms