Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 RNF138P2-201ENST00000603490 592 ntBASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AL121932.1-201ENST00000605542 214 ntBASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
TRAV27A0A087WT01 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TRAV27A0A087WT01 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRAV27A0A087WT01 AC139713.2-215ENST00000641428 5037 ntBASIC4.34□□□□□ -1.72
TRAV27A0A087WT01 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 DHX9P1-201ENST00000436565 3076 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 TLK1P1-201ENST00000456760 2440 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 MRRFP1-201ENST00000435941 1675 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 ARL4AP5-201ENST00000404372 599 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AP002530.1-201ENST00000405705 684 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AL080315.1-201ENST00000406055 466 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 VN1R37P-201ENST00000419096 748 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AL355433.1-201ENST00000422804 300 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 FTLP19-201ENST00000433300 394 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 RPL7P11-201ENST00000437586 658 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 PPIAP20-201ENST00000449839 135 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AL445433.1-201ENST00000457507 257 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 RPS26P39-201ENST00000469206 341 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AC008953.1-201ENST00000497334 318 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AC140172.1-201ENST00000502928 141 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 RN7SKP66-201ENST00000516681 231 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 RN7SKP147-201ENST00000517154 244 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AC234782.5-201ENST00000617723 324 ntBASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRAV27A0A087WT01 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AL590763.1-201ENST00000398297 1545 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 RN7SKP74-201ENST00000362849 309 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 U8.4-201ENST00000363626 134 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 RPS27P18-201ENST00000431701 247 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AC092647.3-201ENST00000443044 633 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 NPM1P19-201ENST00000450070 712 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 RPL37AP8-201ENST00000494116 276 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 RPS4XP18-201ENST00000495480 763 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 FTH1P11-201ENST00000517577 551 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AC013701.1-201ENST00000522657 465 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 SUMO2P15-201ENST00000604285 278 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AC009163.6-201ENST00000612367 342 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 EIF3FP1-201ENST00000613970 806 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 AC097461.1-201ENST00000568928 2821 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 ICE2P1-201ENST00000512800 1849 ntBASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.32□□□□□ -1.72
TRAV27A0A087WT01 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 AL136164.3-201ENST00000624429 3978 ntBASIC4.31□□□□□ -1.72
TRAV27A0A087WT01 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms