Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PABPC1P6-201ENST00000445594 1829 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 MIR137-201ENST00000385223 102 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC092642.1-201ENST00000392417 425 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 MARK2P12-201ENST00000420129 585 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 DDX39BP1-205ENST00000422507 192 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC245047.2-201ENST00000441060 530 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 MTND6P5-201ENST00000448266 512 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AL389915.2-201ENST00000454576 441 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC020890.1-201ENST00000491837 504 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 RN7SKP260-201ENST00000516907 149 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC134698.5-201ENST00000519444 336 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC087283.1-201ENST00000604029 1074 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC108359.1-201ENST00000616451 1211 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC099494.2-201ENST00000623371 978 ntBASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DRB4X5D2U9 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 IL6STP1-201ENST00000346911 1020 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 SNORA2.3-201ENST00000383920 135 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AL050305.1-201ENST00000399993 1230 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 RNA5SP146-201ENST00000410743 123 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 UBA52P7-201ENST00000486088 380 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AC005412.2-201ENST00000492004 341 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 RN7SL441P-201ENST00000492388 296 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AC073073.1-201ENST00000493920 463 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AC113430.1-201ENST00000506872 718 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 HIGD1AP14-201ENST00000507617 282 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 NDUFB4P11-201ENST00000560510 395 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AC018552.1-201ENST00000562099 811 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 RN7SL176P-201ENST00000580352 264 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AP005432.2-201ENST00000608162 586 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 RPSAP73-201ENST00000614820 330 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 AC244517.3-201ENST00000616254 1235 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 MIR6826-201ENST00000617808 98 ntBASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DRB4X5D2U9 OR51C1P-202ENST00000641159 1444 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms