Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 NXPE2P1-201ENST00000543705 726 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC126323.4-201ENST00000566935 234 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SL835P-201ENST00000579920 262 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 SNORD39.2-201ENST00000579995 76 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 TPMTP1-201ENST00000592307 737 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC068790.5-201ENST00000602741 355 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC005070.2-201ENST00000604391 260 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 BCRP9-201ENST00000605312 388 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AL355974.3-201ENST00000617383 467 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC138305.3-201ENST00000624988 240 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AL136981.1-203ENST00000451452 3844 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 AC010401.2-201ENST00000575137 4934 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 HDAC1P1-201ENST00000455482 1445 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 WNK1-220ENST00000574564 1401 ntBASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHB11Q9Y5F2 NF1P8-201ENST00000415351 1461 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AP003119.3-201ENST00000566747 4192 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AP003471.1-202ENST00000319051 1988 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 SNRPEP3-201ENST00000338402 276 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 Y_RNA.159-201ENST00000363674 87 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SKP36-201ENST00000363997 312 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RNU12-2P-201ENST00000364789 156 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 ARMCX7P-201ENST00000372828 562 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RNU6-769P-201ENST00000384407 104 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 MIR606-201ENST00000384851 96 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL122016.1-201ENST00000403365 367 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SKP108-201ENST00000411367 328 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL589872.1-201ENST00000426602 288 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 Z80107.2-201ENST00000445127 392 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SL688P-201ENST00000471754 275 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SL392P-201ENST00000473024 299 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC022730.1-201ENST00000473114 568 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC023194.1-201ENST00000493084 308 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC026427.2-201ENST00000506228 536 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 OR52H2P-201ENST00000514607 902 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 IGKV2D-10-201ENST00000520194 281 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 NDUFA3P2-201ENST00000531434 232 ntBASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.17□□□□□ -1.26
PCDHB11Q9Y5F2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms