Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC100814.1-201ENST00000606963 623 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AL135786.2-201ENST00000608422 615 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC016769.4-201ENST00000616893 535 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC018445.2-201ENST00000622987 260 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC109780.1-201ENST00000451768 1344 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 CASC19-281ENST00000642118 1554 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC007618.1-201ENST00000366455 732 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 SPTLC1P2-201ENST00000407089 121 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 RN7SKP273-201ENST00000411392 314 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 BRWD1P3-201ENST00000428816 390 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 NDUFA5P1-201ENST00000433858 341 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 LYPLA1P1-201ENST00000434514 622 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC046176.1-201ENST00000435260 1170 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 EEF1B2P5-201ENST00000444820 548 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 RN7SL515P-201ENST00000463999 297 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC020779.1-201ENST00000478757 796 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC008953.1-201ENST00000497334 318 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC097173.1-201ENST00000505862 819 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 RNA5SP230-201ENST00000517039 122 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC104997.1-201ENST00000519761 717 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC024940.3-201ENST00000538551 316 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC067805.1-201ENST00000559344 470 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC040958.1-201ENST00000561102 201 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC095055.1-201ENST00000603472 1113 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 BNIP3P35-201ENST00000604530 490 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC004241.3-201ENST00000611728 517 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 FRG1EP-201ENST00000634469 770 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC093775.1-201ENST00000624154 1868 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC022417.1-201ENST00000624768 1303 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 AC007342.7-201ENST00000624610 2337 ntBASIC4.89□□□□□ -1.63
ATG4BQ9Y4P1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 TCP1P3-201ENST00000414406 1498 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 PANDAR-201ENST00000629595 1506 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC083799.1-201ENST00000366451 910 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 RPL10P10-201ENST00000403509 664 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 RPL5P19-201ENST00000404228 893 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 HSPE1P16-201ENST00000426640 348 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC009238.2-201ENST00000431026 355 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 MTCO1P57-201ENST00000432182 261 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AL157884.3-201ENST00000448273 1184 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 NIFKP7-201ENST00000503365 834 ntBASIC4.88□□□□□ -1.63
ATG4BQ9Y4P1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms