Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC012400.1-201ENST00000518452 381 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC134349.2-201ENST00000535136 910 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AL358913.1-201ENST00000554342 121 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AL390334.1-201ENST00000556395 450 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 MIR3934-201ENST00000579806 107 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC011447.4-201ENST00000587562 111 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 AC008833.1-201ENST00000611633 691 ntBASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPIPA1Q9UND3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 MTCO1P15-201ENST00000529569 1526 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AC092747.4-201ENST00000620519 1861 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 SNORA79B-201ENST00000410557 148 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AL136231.1-201ENST00000429407 730 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AL138787.1-202ENST00000437804 898 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AC090804.1-201ENST00000448870 490 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 HIGD1AP8-201ENST00000453927 274 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AC079168.1-201ENST00000458741 345 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AC098976.1-201ENST00000513014 541 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AL671862.1-201ENST00000515851 349 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AC092709.1-201ENST00000521355 1045 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AP002373.2-201ENST00000541631 1060 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 SNORD39.2-201ENST00000579995 76 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AC026367.3-201ENST00000619032 590 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AC107021.2-201ENST00000567714 2095 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 AL450345.1-202ENST00000605741 3881 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 TTC39DP-201ENST00000416781 1688 ntBASIC4.77□□□□□ -1.65
NPIPA1Q9UND3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 RNA5SP123-201ENST00000363244 119 ntBASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 PCNPP4-201ENST00000414817 517 ntBASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC083982.1-201ENST00000485679 344 ntBASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 IMPA1P1-201ENST00000510718 842 ntBASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 TRAV11-201ENST00000539512 339 ntBASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC019322.1-201ENST00000571869 389 ntBASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 MIR4480-201ENST00000582492 71 ntBASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA1Q9UND3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms