Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 PNRC2P1-201ENST00000423940 420 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 VN1R21P-201ENST00000426703 765 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC002504.1-201ENST00000438281 691 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 RPS12P17-201ENST00000438591 377 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC023141.8-201ENST00000442554 208 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 XKRYP5-201ENST00000449659 483 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AL133445.1-201ENST00000467051 452 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC108693.1-201ENST00000496068 432 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 GLUD1P3-202ENST00000508551 200 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC068020.1-201ENST00000594215 661 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC130352.1-201ENST00000602979 661 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC093673.2-201ENST00000609674 331 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AL159169.2-201ENST00000610061 1269 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AL139099.4-201ENST00000614802 114 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 OR8G7P-201ENST00000616658 848 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 Z99129.2-201ENST00000619967 314 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC006963.1-201ENST00000624003 1052 ntBASIC5.53□□□□□ -1.52
VPS4AQ9UN37 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS4AQ9UN37 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC007842.1-201ENST00000597336 2039 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 GVINP1-202ENST00000531871 7271 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 RN7SKP162-201ENST00000363605 345 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 RNU6-1005P-201ENST00000384519 107 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 OR7E101P-201ENST00000400428 513 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 RPL5P19-201ENST00000404228 893 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 MTCYBP7-201ENST00000419540 1134 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 MTND2P5-201ENST00000432656 1006 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC015983.1-201ENST00000441577 373 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 SPRYD7P1-201ENST00000443861 570 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AL031313.1-201ENST00000448435 256 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 HMGB1P5-202ENST00000451497 985 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 RPL5P13-201ENST00000462840 709 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 TPT1P3-201ENST00000492841 512 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 OR7E157P-201ENST00000494376 911 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC092593.2-201ENST00000513866 913 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 EEF1A1P37-201ENST00000522748 715 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC010735.1-201ENST00000567305 1026 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AC145423.1-201ENST00000605712 336 ntBASIC5.52□□□□□ -1.53
VPS4AQ9UN37 AL022394.1-201ENST00000606979 292 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms