Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC092747.4-201ENST00000620519 1861 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC006210.2-201ENST00000367074 1545 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 RN7SKP162-201ENST00000363605 345 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 SNORA68.2-201ENST00000391263 128 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 OR8V1P-201ENST00000395193 873 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 SETP15-201ENST00000412724 337 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 PCNPP4-201ENST00000414817 517 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 OR5M12P-201ENST00000423388 929 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 CLUHP1-201ENST00000435012 1190 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 GAPDHP58-201ENST00000438477 1006 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AL450263.2-201ENST00000439400 589 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC011225.1-201ENST00000457751 369 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC245028.2-201ENST00000458673 253 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 RN7SL189P-201ENST00000468631 289 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC006427.1-201ENST00000514359 712 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC007225.2-201ENST00000562529 256 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 RN7SL708P-201ENST00000580952 299 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 HMGB1P51-201ENST00000605166 638 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC005021.1-201ENST00000608730 355 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AC109309.2-201ENST00000612597 332 ntBASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA9Q9UGM1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 SLC35E1P1-201ENST00000419313 864 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC079355.1-201ENST00000421770 223 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC108075.1-201ENST00000424692 529 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 HSPE1P16-201ENST00000426640 348 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 PA2G4P6-201ENST00000438325 1197 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 RPS4XP12-201ENST00000461747 709 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 RPS4XP20-201ENST00000505751 772 ntBASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CHRNA9Q9UGM1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms