Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 MIR133B-201ENST00000362210 119 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 SNORA16A-201ENST00000384342 137 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RNU6-316P-201ENST00000391027 107 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RN7SKP213-201ENST00000410746 298 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AL445183.3-201ENST00000414168 502 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC006065.1-201ENST00000422539 802 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 NDUFA5P10-201ENST00000432147 357 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 KRT8P51-201ENST00000438938 274 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RPL12P3-201ENST00000440080 396 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC023512.1-201ENST00000444513 499 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 MTND1P33-201ENST00000446251 917 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AL031313.1-201ENST00000448435 256 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 CYCSP42-201ENST00000450823 238 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AL139824.2-201ENST00000458731 1095 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RPL7AP6-201ENST00000477943 801 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RPS7P6-201ENST00000485777 579 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RN7SL447P-201ENST00000494711 245 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 NPM1P42-201ENST00000560329 862 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 SNX6P1-201ENST00000601728 1224 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AL513327.3-201ENST00000602618 469 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC093673.2-201ENST00000609674 331 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 VN1R9P-201ENST00000614184 867 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RMST_10.1-201ENST00000616309 154 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 BNIP3P41-202ENST00000616656 861 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RNA5SP439-201ENST00000617595 124 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC068870.2-201ENST00000620635 389 ntBASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
DNMT3BQ9UBC3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 SPATA2P1-201ENST00000431223 2055 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AC018809.2-201ENST00000602436 3823 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 RNA5SP339-201ENST00000390987 122 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AF228730.1-201ENST00000397972 663 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 RN7SKP125-201ENST00000410481 302 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AL354868.1-201ENST00000417077 482 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AC009506.2-201ENST00000420635 840 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 PNRC2P1-201ENST00000423940 420 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AC093084.1-201ENST00000424233 687 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AL590762.4-201ENST00000425885 253 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 MTCYBP12-201ENST00000440559 1134 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 ELOCP13-201ENST00000443934 329 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 RPS18P6-201ENST00000476880 458 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 OR11I1P-201ENST00000486033 954 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 PDCL3P4-201ENST00000489621 720 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 RPS23P1-201ENST00000491662 432 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AC105233.1-201ENST00000498840 781 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AC093720.1-201ENST00000505681 714 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 PRELID3BP5-201ENST00000508612 460 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 ASNSP4-201ENST00000511103 447 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 SNORA70.11-201ENST00000515987 138 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 SNORA70.13-201ENST00000516116 138 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 MTCYBP19-201ENST00000517463 1124 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 EIF4A2P5-201ENST00000529914 499 ntBASIC5.79□□□□□ -1.48
DNMT3BQ9UBC3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms