Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PARP4P2-201ENST00000446672 3326 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AL034546.1-201ENST00000623740 3693 ntBASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.48□□□□□ -1.53
AMBRA1Q9C0C7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC104966.1-201ENST00000467010 1464 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 MTND4P10-201ENST00000446199 1363 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 SNORA21-201ENST00000362423 132 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 RNA5SP110-201ENST00000362638 115 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 RN7SKP145-201ENST00000363291 303 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 RN7SKP229-201ENST00000410465 302 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 HMGN1P20-201ENST00000411849 300 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 HMGB3P31-201ENST00000413333 595 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL034379.1-201ENST00000423216 253 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 CRIP1P1-201ENST00000427567 185 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL365396.1-201ENST00000430854 671 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL663074.2-201ENST00000440621 479 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 MTCYBP42-201ENST00000444653 1130 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC010240.2-201ENST00000445363 1205 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC023271.1-201ENST00000445936 1090 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC097463.1-201ENST00000447288 481 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC002553.3-201ENST00000453002 341 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 RN7SL197P-201ENST00000466981 299 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 RPS3AP22-201ENST00000488297 769 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC083795.1-201ENST00000491760 320 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC091951.3-201ENST00000504093 246 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 GLUD1P3-202ENST00000508551 200 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 MIR2117-201ENST00000516780 80 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 DEFB130C-202ENST00000530001 230 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 SETP1-201ENST00000556014 845 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 FAM106CP-201ENST00000582212 507 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL513327.3-201ENST00000602618 469 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL020997.3-201ENST00000602843 359 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 MTND3P19-201ENST00000603825 345 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AL158042.1-201ENST00000605338 460 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC016877.3-201ENST00000606778 504 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC009237.15-201ENST00000610252 501 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 TUSC7.1-201ENST00000610969 165 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 RFPL4AP6-201ENST00000616792 846 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC018628.1-201ENST00000624147 3819 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 AC116158.1-201ENST00000560231 2129 ntBASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
AMBRA1Q9C0C7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
AMBRA1Q9C0C7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
AMBRA1Q9C0C7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
AMBRA1Q9C0C7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 RBMY1HP-201ENST00000382759 1389 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL445523.1-201ENST00000451184 1362 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms