Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC015689.2-201ENST00000528172 1738 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 GTF2IP4-201ENST00000453092 2054 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 RNU5F-7P-201ENST00000363696 115 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 Y_RNA.559-201ENST00000384686 107 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 DSTNP4-201ENST00000399472 474 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 RPL12P23-201ENST00000405880 490 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 RN7SKP273-201ENST00000411392 314 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 MRPS21P5-201ENST00000417885 231 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 RPL36P18-201ENST00000419316 318 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC009237.2-201ENST00000421358 284 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AL139184.1-202ENST00000422303 222 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC099336.2-201ENST00000422457 254 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 RPL7P56-201ENST00000429441 717 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AL589823.1-201ENST00000429577 183 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 UBE2FP3-201ENST00000436366 524 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC245291.3-201ENST00000443400 292 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC092601.1-201ENST00000444526 383 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC073909.1-201ENST00000447112 999 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 RPL26P30-201ENST00000453533 435 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC099560.2-201ENST00000457554 255 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 RN7SL809P-201ENST00000482040 297 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AL390198.2-201ENST00000510553 222 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 KRT19P6-201ENST00000510983 209 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 OR52H2P-201ENST00000514607 902 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC011260.1-201ENST00000578420 472 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC008759.1-201ENST00000589783 983 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AL596327.1-201ENST00000603629 213 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC114477.1-201ENST00000605097 605 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC008115.3-201ENST00000614874 549 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AL392088.2-201ENST00000637607 285 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 LINC01739-205ENST00000641890 573 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 KARSP3-201ENST00000571212 1504 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 SNORA64.3-201ENST00000365647 134 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC245036.1-201ENST00000391727 309 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 RPL9P21-201ENST00000392269 505 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 SNORA11.5-201ENST00000408163 128 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 RN7SKP271-201ENST00000410528 320 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 RN7SKP188-201ENST00000410789 317 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC073335.1-201ENST00000427776 363 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 HSPD1P12-201ENST00000429127 1069 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 BMS1P19-201ENST00000433925 393 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 RPL7AP23-201ENST00000482625 776 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 RNU2-30P-201ENST00000516209 141 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 AC008802.1-201ENST00000519121 791 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 OR5M2P-201ENST00000529003 936 ntBASIC7.35□□□□□ -1.23
TRAIPQ9BWF2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms