Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC125257.1-201ENST00000560400 2930 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 RN7SKP27-201ENST00000410684 333 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 NPM1P36-201ENST00000415681 835 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 GLUD1P9-201ENST00000420997 1173 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 RPS27AP6-201ENST00000427962 448 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 AC026402.1-201ENST00000513642 170 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 AC020937.1-201ENST00000519677 1013 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 AC021483.2-201ENST00000567415 758 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 AC067959.1-201ENST00000604334 379 ntBASIC5.94□□□□□ -1.46
SNED1Q8TER0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SNED1Q8TER0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AC007382.1-201ENST00000624376 2618 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 IGKV7-3-201ENST00000357453 298 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 RNA5SP509-201ENST00000364577 119 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 SNORA57.1-201ENST00000391227 145 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 RPL12P28-201ENST00000430852 489 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 KCTD10P1-201ENST00000434203 625 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 NPM1P33-201ENST00000438918 872 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 PRPF38AP1-201ENST00000451976 933 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AC011276.1-201ENST00000469688 323 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AL109766.1-201ENST00000555080 552 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 MIR1254-2-201ENST00000579553 63 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AP001002.2-201ENST00000625137 386 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 SMG1P7-201ENST00000565246 2704 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.93□□□□□ -1.46
SNED1Q8TER0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 AL442639.1-201ENST00000625030 1899 ntBASIC5.93□□□□□ -1.46
SNED1Q8TER0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNED1Q8TER0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 RNU6-673P-201ENST00000365084 104 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC097523.2-201ENST00000435551 652 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 ARL2BPP10-201ENST00000446487 531 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC109327.1-201ENST00000471666 403 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 RNA5SP464-201ENST00000516251 108 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC026688.1-201ENST00000520639 1168 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AL049839.1-201ENST00000556151 657 ntBASIC5.92□□□□□ -1.46
SNED1Q8TER0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.92□□□□□ -1.46
SNED1Q8TER0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNED1Q8TER0 AL137141.1-201ENST00000624622 4836 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms