Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 TXNP5-201ENST00000441043 315 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL512605.1-202ENST00000441919 381 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL359955.2-201ENST00000445380 353 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 VN1R38P-201ENST00000450265 887 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 RPL23AP71-201ENST00000470966 469 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC108734.3-201ENST00000481241 1165 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC021193.1-201ENST00000511607 420 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC008837.2-201ENST00000513076 418 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 Y_RNA.710-201ENST00000516975 110 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 GCSHP4-201ENST00000538792 439 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 ELOCP32-201ENST00000548625 324 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL442163.2-201ENST00000553912 710 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 HIGD1AP17-201ENST00000554576 276 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC016839.1-201ENST00000578162 867 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC006539.2-201ENST00000601729 572 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL360219.1-201ENST00000610230 366 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 RNA5SP440-201ENST00000612665 119 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC022106.1-201ENST00000612834 766 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL136228.1-201ENST00000622221 319 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC012254.5-201ENST00000623573 478 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 MTND5P31-201ENST00000419366 1374 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC005332.9-201ENST00000620266 2921 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SYNPOQ8N3V7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AF287957.1-201ENST00000607368 1595 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 DOCK11P1-201ENST00000553480 5932 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC022325.1-201ENST00000502748 2199 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 MIR16-1-201ENST00000385271 89 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 MIR1302-8-201ENST00000408342 128 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 NRBF2P2-201ENST00000413087 861 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 USP9YP26-201ENST00000421008 661 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC090960.1-201ENST00000421072 306 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 ATP5F1P1-201ENST00000433775 569 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 GTF2IP7-202ENST00000436677 309 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 MTND3P1-201ENST00000441336 220 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC064862.4-201ENST00000442180 334 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 CUBNP2-201ENST00000443534 1139 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 RPF2P2-201ENST00000504693 896 ntBASIC6.27□□□□□ -1.41
SYNPOQ8N3V7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms