Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC106800.2-201ENST00000514009 1103 ntBASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 MTND4LP26-201ENST00000518144 282 ntBASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AC008507.1-201ENST00000587506 734 ntBASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 MTCYBP22-201ENST00000603788 447 ntBASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 MIR6862-1-201ENST00000613016 70 ntBASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 MIR6862-2-201ENST00000614755 70 ntBASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AL354718.1-201ENST00000619764 589 ntBASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NPAS4Q8IUM7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 Y_RNA.3-201ENST00000362331 103 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 U3.4-201ENST00000363352 213 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 Y_RNA.408-201ENST00000383987 102 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 RNU6-1151P-201ENST00000384684 107 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 RNU2-6P-201ENST00000411404 190 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 USP9YP33-201ENST00000412220 421 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 GSTM3P2-201ENST00000412746 530 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC062016.2-201ENST00000420950 676 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 USP9YP35-201ENST00000435696 412 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 CDC27P1-201ENST00000445384 715 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC002486.2-201ENST00000447806 590 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 SUMO2P2-201ENST00000456482 255 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 SNX18P24-201ENST00000505249 671 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 HMGB1P44-201ENST00000508597 572 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 HSPE1P23-201ENST00000509838 286 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 RNA5SP206-201ENST00000516703 121 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC036111.2-201ENST00000533247 901 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC138915.2-201ENST00000569776 97 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 ROCK1P1-201ENST00000573767 549 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC011260.1-201ENST00000578420 472 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC079089.3-201ENST00000603094 673 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC073046.2-201ENST00000604756 527 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AL080312.2-201ENST00000613001 630 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC092650.2-201ENST00000619984 902 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AL356266.1-201ENST00000623311 483 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 AC087565.3-203ENST00000641018 837 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 PWAR1-201ENST00000624188 2414 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NPAS4Q8IUM7 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms