Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL034549.2-201ENST00000618285 3373 ntBASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 AC092376.2-201ENST00000622621 4116 ntBASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.26□□□□□ -1.57
ZNF549Q6P9A3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 RNU1-77P-201ENST00000390868 162 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC092648.1-201ENST00000425870 423 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC069277.2-201ENST00000454211 432 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 RN7SL547P-201ENST00000490793 290 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC138832.1-201ENST00000522871 556 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 OR7E10P-201ENST00000526420 991 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC126177.5-201ENST00000549599 178 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC233266.2-201ENST00000567067 528 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC008751.2-201ENST00000597885 980 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC002069.2-201ENST00000603580 883 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC018690.1-201ENST00000608144 626 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AC007204.2-201ENST00000615022 616 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 AP003399.1-201ENST00000637534 361 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 CASC19-248ENST00000641674 1356 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 CR788268.1-201ENST00000603931 1809 ntBASIC5.25□□□□□ -1.57
ZNF549Q6P9A3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RN7SKP186-201ENST00000365371 303 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RNU6-650P-201ENST00000365658 111 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 MIR589-201ENST00000385238 99 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RNA5SP339-201ENST00000390987 122 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 SNORA17A-201ENST00000391185 133 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RNA5SP487-201ENST00000410186 122 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RN7SKP293-201ENST00000411389 296 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AL390774.1-201ENST00000411924 246 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 OR2X1P-201ENST00000421144 687 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 RCC2P2-201ENST00000422174 918 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AL365338.1-201ENST00000422282 858 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 CYCSP12-201ENST00000437729 300 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC007000.2-201ENST00000442564 487 ntBASIC5.24□□□□□ -1.57
ZNF549Q6P9A3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms