Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC96Q2M329 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC092747.4-201ENST00000620519 1861 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC007342.7-201ENST00000624610 2337 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 SNORA17.1-201ENST00000362945 126 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 RNU6-618P-201ENST00000363518 112 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 SNORA58B-201ENST00000364259 136 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 MTCO1P45-201ENST00000431457 267 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC097523.2-201ENST00000435551 652 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 RSL24D1P2-201ENST00000445584 366 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 RN7SL610P-201ENST00000463845 291 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 RN7SL591P-201ENST00000496150 292 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 SNRPCP2-201ENST00000504370 475 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 GTF2F2P1-201ENST00000511083 675 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC96Q2M329 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC084373.1-201ENST00000603311 235 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC009163.6-201ENST00000612367 342 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 AC037198.3-201ENST00000616754 526 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 AP003400.3-201ENST00000624904 346 ntBASIC6.15□□□□□ -1.42
CCDC96Q2M329 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC96Q2M329 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC96Q2M329 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC96Q2M329 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC96Q2M329 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC96Q2M329 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC96Q2M329 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC96Q2M329 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 SMG1P6-201ENST00000532337 2930 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC96Q2M329 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 MIR600-201ENST00000385007 98 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 ST13P16-201ENST00000401760 781 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AL512430.2-201ENST00000406786 339 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 U3.36-201ENST00000408418 213 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC211486.3-201ENST00000412694 621 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC009302.1-201ENST00000417147 390 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC006455.6-201ENST00000426192 893 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC022022.1-201ENST00000430304 178 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 Z85994.2-201ENST00000434327 452 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 GAPDHP58-201ENST00000438477 1006 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 AL157884.3-201ENST00000448273 1184 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 RPL7AP6-201ENST00000477943 801 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC008410.1-201ENST00000483777 339 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 IGBP1P4-201ENST00000503202 879 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC006116.3-201ENST00000592968 361 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 AC095055.1-201ENST00000603472 1113 ntBASIC6.14□□□□□ -1.43
CCDC96Q2M329 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CCDC96Q2M329 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC96Q2M329 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC96Q2M329 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC96Q2M329 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC96Q2M329 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC96Q2M329 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC96Q2M329 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC96Q2M329 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC96Q2M329 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC96Q2M329 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC96Q2M329 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC96Q2M329 RNU6-670P-201ENST00000364312 104 ntBASIC6.13□□□□□ -1.43
CCDC96Q2M329 AL645927.1-201ENST00000396783 406 ntBASIC6.13□□□□□ -1.43
CCDC96Q2M329 NPM1P10-201ENST00000398310 865 ntBASIC6.13□□□□□ -1.43
CCDC96Q2M329 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC96Q2M329 AC016769.2-201ENST00000414815 475 ntBASIC6.13□□□□□ -1.43
CCDC96Q2M329 OR6K4P-201ENST00000423179 955 ntBASIC6.13□□□□□ -1.43
CCDC96Q2M329 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC96Q2M329 MAPRE1P3-201ENST00000435438 796 ntBASIC6.13□□□□□ -1.43
CCDC96Q2M329 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC96Q2M329 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms