Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNA5SP392-201ENST00000516905 112 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 AC026688.1-201ENST00000520639 1168 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 RPL23AP53-201ENST00000521854 457 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 AP000676.2-201ENST00000529711 301 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 AC005868.1-201ENST00000536421 331 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 GCSHP4-201ENST00000538792 439 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 MIR4646-201ENST00000580775 63 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 AC011487.3-201ENST00000593607 453 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 AC087783.2-201ENST00000605070 562 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 AC133644.2-201ENST00000608142 540 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 AC087385.3-201ENST00000620477 187 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.44□□□□□ -1.7
FOXF1Q12946 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
FOXF1Q12946 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 IRF5P1-201ENST00000504852 2164 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 AC008758.3-201ENST00000507003 1829 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 AC000374.1-201ENST00000434698 1745 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 SNORA51.8-201ENST00000384234 132 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 RN7SKP97-201ENST00000410966 333 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 COX6B1P1-201ENST00000415962 213 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 AC007394.1-201ENST00000421941 531 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF1Q12946 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 RPL12P3-201ENST00000440080 396 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 SLC25A18P1-201ENST00000449385 454 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 RN7SL826P-201ENST00000479724 288 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF1Q12946 AP006245.2-201ENST00000522004 300 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF1Q12946 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXF1Q12946 AC021006.3-201ENST00000530771 192 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXF1Q12946 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXF1Q12946 AL049830.4-201ENST00000555149 351 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
FOXF1Q12946 OR1F2P-201ENST00000570470 933 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 AC006272.2-201ENST00000594725 163 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 AC020910.3-201ENST00000603701 874 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 AC073575.2-201ENST00000614212 627 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 AL022401.1-201ENST00000619498 108 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
FOXF1Q12946 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXF1Q12946 AC131971.1-201ENST00000332881 1482 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 AC112255.1-201ENST00000624070 2493 ntBASIC4.43□□□□□ -1.7
FOXF1Q12946 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF1Q12946 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF1Q12946 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF1Q12946 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXF1Q12946 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF1Q12946 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF1Q12946 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
FOXF1Q12946 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
FOXF1Q12946 HMGB3P7-201ENST00000400214 611 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF1Q12946 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF1Q12946 GYG1P1-201ENST00000460864 698 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 RN7SL517P-201ENST00000462240 305 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF1Q12946 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
FOXF1Q12946 MORF4L1P3-201ENST00000525966 950 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 AC008033.2-201ENST00000542626 177 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.42□□□□□ -1.7
FOXF1Q12946 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF1Q12946 AL049839.1-201ENST00000556151 657 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF1Q12946 AP001521.2-201ENST00000608772 546 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 AL353684.1-201ENST00000622677 1120 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 AC243960.7-201ENST00000623532 707 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF1Q12946 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.42□□□□□ -1.7
FOXF1Q12946 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXF1Q12946 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF1Q12946 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXF1Q12946 ZNF652P1-201ENST00000442420 1309 ntBASIC4.42□□□□□ -1.7
FOXF1Q12946 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXF1Q12946 AC007342.5-201ENST00000571340 2142 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms