Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RN7SKP240-201ENST00000410583 375 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 RN7SKP121-201ENST00000410842 305 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 RPS7P13-201ENST00000413955 498 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AC138393.2-201ENST00000414742 246 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX4Q06945 DEFA9P-201ENST00000433042 285 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AC000111.3-201ENST00000433478 193 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 PNKDP1-201ENST00000435914 430 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX4Q06945 COX6CP12-201ENST00000446748 202 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AL034418.1-201ENST00000448675 860 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 DDX39BP2-208ENST00000453923 258 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 MTCO2P30-201ENST00000503662 364 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX4Q06945 OR51A1P-201ENST00000511110 946 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 SUMO2P7-201ENST00000511179 285 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 AP005639.2-201ENST00000527592 928 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AC044913.1-201ENST00000557200 430 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AC005730.3-201ENST00000583067 366 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.81□□□□□ -1.32
SOX4Q06945 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 AL022154.1-201ENST00000604698 785 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AC064836.2-201ENST00000609491 462 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 AL359697.1-201ENST00000624879 587 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 AC009135.2-201ENST00000624136 1768 ntBASIC6.81□□□□□ -1.32
SOX4Q06945 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX4Q06945 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX4Q06945 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SOX4Q06945 AC013488.1-201ENST00000526618 1838 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 ZNF680P1-201ENST00000436625 1469 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 MTND5P26-201ENST00000426018 1752 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SOX4Q06945 OR11H13P-201ENST00000359695 979 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 MIR181A1-201ENST00000385026 110 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 SNORA77.2-201ENST00000408571 112 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 AC010385.1-201ENST00000412374 256 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 TPT1P2-201ENST00000413105 503 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.8□□□□□ -1.32
SOX4Q06945 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.8□□□□□ -1.32
SOX4Q06945 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 OR8F1P-201ENST00000425243 930 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 AL035407.2-201ENST00000454090 378 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 OR9M1P-201ENST00000459641 921 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX4Q06945 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 AP002453.1-201ENST00000492327 668 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 AC023424.2-201ENST00000493479 777 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 CCDC11P1-201ENST00000503137 1162 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SOX4Q06945 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX4Q06945 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.8□□□□□ -1.32
SOX4Q06945 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.8□□□□□ -1.32
SOX4Q06945 AC004825.1-201ENST00000555068 586 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.8□□□□□ -1.32
SOX4Q06945 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX4Q06945 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX4Q06945 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX4Q06945 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX4Q06945 MTCO2P22-201ENST00000603246 681 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 AL591167.1-201ENST00000607321 456 ntBASIC6.8□□□□□ -1.32
SOX4Q06945 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms