Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC234781.3-201ENST00000452540 973 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.77□□□□□ -1.49
GABPAQ06546 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.77□□□□□ -1.49
GABPAQ06546 RN7SL738P-201ENST00000470264 297 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 AC096741.1-201ENST00000472250 846 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 NIFKP7-201ENST00000503365 834 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
GABPAQ06546 RN7SKP276-201ENST00000516242 268 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.77□□□□□ -1.49
GABPAQ06546 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.77□□□□□ -1.49
GABPAQ06546 OOSP1P2-201ENST00000579644 351 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 RN7SL690P-201ENST00000582087 240 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.77□□□□□ -1.49
GABPAQ06546 AC008745.1-201ENST00000604064 271 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.77□□□□□ -1.49
GABPAQ06546 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.77□□□□□ -1.49
GABPAQ06546 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.77□□□□□ -1.49
GABPAQ06546 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.77□□□□□ -1.49
GABPAQ06546 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GABPAQ06546 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GABPAQ06546 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.77□□□□□ -1.49
GABPAQ06546 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GABPAQ06546 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.77□□□□□ -1.49
GABPAQ06546 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GABPAQ06546 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GABPAQ06546 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.77□□□□□ -1.49
GABPAQ06546 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GABPAQ06546 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
GABPAQ06546 AC022417.1-201ENST00000624768 1303 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.76□□□□□ -1.49
GABPAQ06546 AC008758.3-201ENST00000507003 1829 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
GABPAQ06546 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 SNORA73.1-201ENST00000363107 205 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 ADAM24P-201ENST00000398655 2101 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 NPM1P38-201ENST00000403835 865 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 AC114755.2-201ENST00000413520 361 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.76□□□□□ -1.49
GABPAQ06546 NFYAP1-201ENST00000431953 972 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.76□□□□□ -1.49
GABPAQ06546 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.76□□□□□ -1.49
GABPAQ06546 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.76□□□□□ -1.49
GABPAQ06546 AC006967.1-201ENST00000467608 589 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.76□□□□□ -1.49
GABPAQ06546 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.76□□□□□ -1.49
GABPAQ06546 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.76□□□□□ -1.49
GABPAQ06546 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.76□□□□□ -1.49
GABPAQ06546 BUD31P1-201ENST00000521828 359 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 GTF2IP11-201ENST00000526931 420 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.76□□□□□ -1.49
GABPAQ06546 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.76□□□□□ -1.49
GABPAQ06546 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.76□□□□□ -1.49
GABPAQ06546 AC023389.2-201ENST00000580031 955 ntBASIC5.76□□□□□ -1.49
GABPAQ06546 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.76□□□□□ -1.49
GABPAQ06546 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
GABPAQ06546 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.76□□□□□ -1.49
GABPAQ06546 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GABPAQ06546 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.75□□□□□ -1.49
GABPAQ06546 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.75□□□□□ -1.49
GABPAQ06546 AC004817.4-201ENST00000602396 3625 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 SMG1P6-201ENST00000532337 2930 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 AC010928.1-201ENST00000592477 1447 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GABPAQ06546 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GABPAQ06546 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GABPAQ06546 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GABPAQ06546 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
GABPAQ06546 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
GABPAQ06546 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.75□□□□□ -1.49
GABPAQ06546 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.75□□□□□ -1.49
GABPAQ06546 RNU2-50P-201ENST00000410494 143 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 QRSL1P2-201ENST00000418582 964 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.75□□□□□ -1.49
GABPAQ06546 AL354766.1-201ENST00000423396 542 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
GABPAQ06546 NPM1P48-201ENST00000436002 853 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 RPS5P7-201ENST00000456664 608 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 GYG1P1-201ENST00000460864 698 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 RN7SL517P-201ENST00000462240 305 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.75□□□□□ -1.49
GABPAQ06546 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.75□□□□□ -1.49
GABPAQ06546 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.75□□□□□ -1.49
GABPAQ06546 SOX5P1-201ENST00000524155 1127 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 OR5AN2P-201ENST00000534535 896 ntBASIC5.75□□□□□ -1.49
GABPAQ06546 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.75□□□□□ -1.49
GABPAQ06546 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GABPAQ06546 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.75□□□□□ -1.49
GABPAQ06546 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms