Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNA5SP228-201ENST00000516232 133 ntBASIC4.39□□□□□ -1.71
UBA52P62987 SCARNA16.4-201ENST00000516956 187 ntBASIC4.39□□□□□ -1.71
UBA52P62987 AP001922.4-201ENST00000526967 290 ntBASIC4.39□□□□□ -1.71
UBA52P62987 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.39□□□□□ -1.71
UBA52P62987 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
UBA52P62987 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.39□□□□□ -1.71
UBA52P62987 AC060766.1-201ENST00000590824 627 ntBASIC4.39□□□□□ -1.71
UBA52P62987 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.39□□□□□ -1.71
UBA52P62987 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBA52P62987 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.39□□□□□ -1.71
UBA52P62987 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.39□□□□□ -1.71
UBA52P62987 AC109583.2-201ENST00000617367 129 ntBASIC4.39□□□□□ -1.71
UBA52P62987 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBA52P62987 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UBA52P62987 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.39□□□□□ -1.71
UBA52P62987 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UBA52P62987 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
UBA52P62987 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.39□□□□□ -1.71
UBA52P62987 OR51C1P-202ENST00000641159 1444 ntBASIC4.38□□□□□ -1.71
UBA52P62987 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
UBA52P62987 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 AL133388.1-201ENST00000404509 287 ntBASIC4.38□□□□□ -1.71
UBA52P62987 U3.36-201ENST00000408418 213 ntBASIC4.38□□□□□ -1.71
UBA52P62987 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.38□□□□□ -1.71
UBA52P62987 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 AC093655.2-201ENST00000425735 631 ntBASIC4.38□□□□□ -1.71
UBA52P62987 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.38□□□□□ -1.71
UBA52P62987 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.38□□□□□ -1.71
UBA52P62987 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.38□□□□□ -1.71
UBA52P62987 GYG1P1-201ENST00000460864 698 ntBASIC4.38□□□□□ -1.71
UBA52P62987 AC108161.1-201ENST00000461060 402 ntBASIC4.38□□□□□ -1.71
UBA52P62987 AC090142.2-201ENST00000483263 416 ntBASIC4.38□□□□□ -1.71
UBA52P62987 RN7SL814P-201ENST00000487715 300 ntBASIC4.38□□□□□ -1.71
UBA52P62987 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.38□□□□□ -1.71
UBA52P62987 RNA5SP249-201ENST00000516127 99 ntBASIC4.38□□□□□ -1.71
UBA52P62987 RNU6-941P-201ENST00000516346 108 ntBASIC4.38□□□□□ -1.71
UBA52P62987 AC134698.5-201ENST00000519444 336 ntBASIC4.38□□□□□ -1.71
UBA52P62987 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.38□□□□□ -1.71
UBA52P62987 OR8G3P-201ENST00000533406 921 ntBASIC4.38□□□□□ -1.71
UBA52P62987 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.38□□□□□ -1.71
UBA52P62987 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.38□□□□□ -1.71
UBA52P62987 OR11H3P-201ENST00000554547 982 ntBASIC4.38□□□□□ -1.71
UBA52P62987 AC011270.1-201ENST00000558606 583 ntBASIC4.38□□□□□ -1.71
UBA52P62987 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.38□□□□□ -1.71
UBA52P62987 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.38□□□□□ -1.71
UBA52P62987 AC069307.1-201ENST00000602820 447 ntBASIC4.38□□□□□ -1.71
UBA52P62987 AC087283.1-201ENST00000604029 1074 ntBASIC4.38□□□□□ -1.71
UBA52P62987 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.38□□□□□ -1.71
UBA52P62987 AC135068.5-201ENST00000624197 983 ntBASIC4.38□□□□□ -1.71
UBA52P62987 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
UBA52P62987 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 AC097461.1-201ENST00000568928 2821 ntBASIC4.38□□□□□ -1.71
UBA52P62987 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UBA52P62987 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.38□□□□□ -1.71
UBA52P62987 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 MTCO1P46-201ENST00000451639 1491 ntBASIC4.37□□□□□ -1.71
UBA52P62987 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 AC092435.4-201ENST00000623012 4159 ntBASIC4.37□□□□□ -1.71
UBA52P62987 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
UBA52P62987 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 IL6STP1-201ENST00000346911 1020 ntBASIC4.37□□□□□ -1.71
UBA52P62987 AL109941.1-201ENST00000401925 229 ntBASIC4.37□□□□□ -1.71
UBA52P62987 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.37□□□□□ -1.71
UBA52P62987 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.37□□□□□ -1.71
UBA52P62987 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.37□□□□□ -1.71
UBA52P62987 RPS26P13-201ENST00000419030 330 ntBASIC4.37□□□□□ -1.71
UBA52P62987 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.37□□□□□ -1.71
UBA52P62987 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.37□□□□□ -1.71
UBA52P62987 SRSF1P1-201ENST00000424058 520 ntBASIC4.37□□□□□ -1.71
UBA52P62987 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UBA52P62987 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.37□□□□□ -1.71
UBA52P62987 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.37□□□□□ -1.71
UBA52P62987 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.37□□□□□ -1.71
UBA52P62987 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.37□□□□□ -1.71
UBA52P62987 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.37□□□□□ -1.71
UBA52P62987 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.37□□□□□ -1.71
UBA52P62987 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.37□□□□□ -1.71
UBA52P62987 HIGD1AP8-201ENST00000453927 274 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms