Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.42□□□□□ -1.38
RHBDL3P58872 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.42□□□□□ -1.38
RHBDL3P58872 AL163051.2-201ENST00000618976 735 ntBASIC6.42□□□□□ -1.38
RHBDL3P58872 AP002967.1-201ENST00000624203 539 ntBASIC6.42□□□□□ -1.38
RHBDL3P58872 AC074101.1-201ENST00000637861 241 ntBASIC6.42□□□□□ -1.38
RHBDL3P58872 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RHBDL3P58872 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RHBDL3P58872 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RHBDL3P58872 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RHBDL3P58872 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RHBDL3P58872 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
RHBDL3P58872 AC093311.1-201ENST00000506586 2021 ntBASIC6.42□□□□□ -1.38
RHBDL3P58872 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.42□□□□□ -1.38
RHBDL3P58872 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RHBDL3P58872 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.41□□□□□ -1.38
RHBDL3P58872 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.41□□□□□ -1.38
RHBDL3P58872 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 AL034549.2-201ENST00000618285 3373 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 RNU6-304P-201ENST00000364855 107 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 RN7SKP125-201ENST00000410481 302 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AC048351.1-201ENST00000420064 602 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AL606495.1-201ENST00000422100 813 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AL590762.4-201ENST00000425885 253 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 RPS4XP16-201ENST00000427198 791 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.41□□□□□ -1.38
RHBDL3P58872 RNFT1P2-201ENST00000443064 757 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AC099063.2-201ENST00000446360 662 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 IGBP1P3-201ENST00000447449 1000 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AC104634.1-201ENST00000452720 462 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 RPL10P17-201ENST00000453852 316 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 HMGB1P4-201ENST00000455362 567 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 EIF2S2P5-201ENST00000457635 968 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AL049829.1-201ENST00000465411 156 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 RPS4XP20-201ENST00000505751 772 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AC147055.3-201ENST00000510547 851 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.41□□□□□ -1.38
RHBDL3P58872 IGKV2D-10-201ENST00000520194 281 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.41□□□□□ -1.38
RHBDL3P58872 AC092451.2-201ENST00000538746 658 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.41□□□□□ -1.38
RHBDL3P58872 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.41□□□□□ -1.38
RHBDL3P58872 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.41□□□□□ -1.38
RHBDL3P58872 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.41□□□□□ -1.38
RHBDL3P58872 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.41□□□□□ -1.38
RHBDL3P58872 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 KYNUP3-201ENST00000574386 1341 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RHBDL3P58872 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 AC096656.1-201ENST00000623826 1364 ntBASIC6.41□□□□□ -1.38
RHBDL3P58872 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RHBDL3P58872 AC009313.2-201ENST00000417893 1941 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.4□□□□□ -1.38
RHBDL3P58872 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RHBDL3P58872 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.4□□□□□ -1.38
RHBDL3P58872 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.4□□□□□ -1.38
RHBDL3P58872 METTL21EP-201ENST00000298105 713 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 RNA5SP305-201ENST00000362665 119 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 SNORA17.1-201ENST00000362945 126 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 MIR142-201ENST00000384835 87 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 ATP5F1P6-201ENST00000402768 767 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 AC009302.1-201ENST00000417147 390 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.4□□□□□ -1.38
RHBDL3P58872 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.4□□□□□ -1.38
RHBDL3P58872 MOB1AP2-201ENST00000446060 614 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 AC069540.1-201ENST00000446320 988 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RHBDL3P58872 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.4□□□□□ -1.38
RHBDL3P58872 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AC092754.1-201ENST00000472975 479 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 AC090114.3-201ENST00000479267 829 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 RN7SL205P-201ENST00000490174 284 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.4□□□□□ -1.38
RHBDL3P58872 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RHBDL3P58872 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RHBDL3P58872 OR8G3P-201ENST00000533406 921 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 UBTFL9-201ENST00000534504 1148 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.4□□□□□ -1.38
RHBDL3P58872 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.4□□□□□ -1.38
RHBDL3P58872 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AC068714.1-201ENST00000559623 800 ntBASIC6.4□□□□□ -1.38
RHBDL3P58872 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.4□□□□□ -1.38
RHBDL3P58872 AC009962.1-201ENST00000567327 3813 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms