Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CDH12P55289 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CDH12P55289 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 SNORD56.4-201ENST00000363883 71 ntBASIC5.07□□□□□ -1.6
CDH12P55289 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 OR1L6-202ENST00000373684 1044 ntBASIC5.07□□□□□ -1.6
CDH12P55289 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH12P55289 RNA5SP105-201ENST00000391123 113 ntBASIC5.07□□□□□ -1.6
CDH12P55289 OR7E156P-201ENST00000400303 464 ntBASIC5.07□□□□□ -1.6
CDH12P55289 RNU4-74P-201ENST00000411280 161 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AC008173.1-201ENST00000418901 264 ntBASIC5.07□□□□□ -1.6
CDH12P55289 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH12P55289 AC007161.1-204ENST00000423039 460 ntBASIC5.07□□□□□ -1.6
CDH12P55289 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH12P55289 RPL7AP49-201ENST00000429522 581 ntBASIC5.07□□□□□ -1.6
CDH12P55289 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH12P55289 AL591438.1-201ENST00000433508 581 ntBASIC5.07□□□□□ -1.6
CDH12P55289 RPL19P16-201ENST00000433839 588 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH12P55289 PA2G4P6-201ENST00000438325 1197 ntBASIC5.07□□□□□ -1.6
CDH12P55289 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH12P55289 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 AC019084.1-201ENST00000457337 432 ntBASIC5.07□□□□□ -1.6
CDH12P55289 TPT1P3-201ENST00000492841 512 ntBASIC5.07□□□□□ -1.6
CDH12P55289 BTG4P1-201ENST00000510421 183 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AC006499.4-201ENST00000510947 694 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH12P55289 RNU6-276P-201ENST00000516114 96 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AC091163.3-201ENST00000518269 1144 ntBASIC5.07□□□□□ -1.6
CDH12P55289 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH12P55289 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH12P55289 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH12P55289 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 AC010487.1-201ENST00000594408 1172 ntBASIC5.07□□□□□ -1.6
CDH12P55289 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 SNX6P1-201ENST00000601728 1224 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AC067773.1-201ENST00000603284 1094 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AC025175.1-201ENST00000606482 759 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AL157392.4-201ENST00000609756 345 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AC025574.2-201ENST00000615621 514 ntBASIC5.07□□□□□ -1.6
CDH12P55289 AC048344.4-201ENST00000619744 527 ntBASIC5.07□□□□□ -1.6
CDH12P55289 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 AL138820.1-201ENST00000617901 5305 ntBASIC5.07□□□□□ -1.6
CDH12P55289 MUC2-202ENST00000613187 4845 ntBASIC5.07□□□□□ -1.6
CDH12P55289 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH12P55289 DDX18P6-201ENST00000450119 1997 ntBASIC5.07□□□□□ -1.6
CDH12P55289 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH12P55289 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 AC068870.3-201ENST00000625077 2536 ntBASIC5.06□□□□□ -1.6
CDH12P55289 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 MTND5P23-201ENST00000430812 1655 ntBASIC5.06□□□□□ -1.6
CDH12P55289 SRRM1P3-201ENST00000426911 2678 ntBASIC5.06□□□□□ -1.6
CDH12P55289 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDH12P55289 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 MIR375-201ENST00000362103 64 ntBASIC5.06□□□□□ -1.6
CDH12P55289 RNA5SP394-201ENST00000364216 119 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AP002784.2-201ENST00000397300 549 ntBASIC5.06□□□□□ -1.6
CDH12P55289 HMGB1P20-201ENST00000402555 677 ntBASIC5.06□□□□□ -1.6
CDH12P55289 ZNF602P-201ENST00000405929 924 ntBASIC5.06□□□□□ -1.6
CDH12P55289 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.06□□□□□ -1.6
CDH12P55289 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 AC115283.1-201ENST00000427353 400 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH12P55289 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH12P55289 AC069540.1-201ENST00000446320 988 ntBASIC5.06□□□□□ -1.6
CDH12P55289 RPL7P61-201ENST00000451721 751 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH12P55289 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH12P55289 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 AC098976.1-201ENST00000513014 541 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms