Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MTCO1P31-201ENST00000506355 492 ntBASIC4.89□□□□□ -1.63
CDH11P55287 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH11P55287 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH11P55287 OR8G3P-201ENST00000533406 921 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AC027369.5-201ENST00000533838 755 ntBASIC4.89□□□□□ -1.63
CDH11P55287 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.89□□□□□ -1.63
CDH11P55287 OR11H3P-201ENST00000554547 982 ntBASIC4.89□□□□□ -1.63
CDH11P55287 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 AC015720.2-201ENST00000567709 334 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AP005403.1-201ENST00000579720 229 ntBASIC4.89□□□□□ -1.63
CDH11P55287 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 AP000769.2-201ENST00000602344 396 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AP004372.1-201ENST00000604842 844 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AC026790.2-201ENST00000606282 430 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 AC244107.2-201ENST00000611773 76 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CDH11P55287 AC135068.5-201ENST00000624197 983 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AC099654.6-201ENST00000636487 512 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AL590396.2-201ENST00000636511 1041 ntBASIC4.89□□□□□ -1.63
CDH11P55287 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CDH11P55287 AL136520.1-201ENST00000600311 1322 ntBASIC4.89□□□□□ -1.63
CDH11P55287 AC079298.1-201ENST00000625026 1619 ntBASIC4.89□□□□□ -1.63
CDH11P55287 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.89□□□□□ -1.63
CDH11P55287 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.89□□□□□ -1.63
CDH11P55287 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDH11P55287 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CDH11P55287 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH11P55287 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 MTHFD2P5-201ENST00000320415 844 ntBASIC4.88□□□□□ -1.63
CDH11P55287 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH11P55287 RNU1-19P-201ENST00000363306 165 ntBASIC4.88□□□□□ -1.63
CDH11P55287 RNU6-609P-201ENST00000365459 107 ntBASIC4.88□□□□□ -1.63
CDH11P55287 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 AL355433.1-201ENST00000422804 300 ntBASIC4.88□□□□□ -1.63
CDH11P55287 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH11P55287 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH11P55287 MTND2P21-201ENST00000436242 1042 ntBASIC4.88□□□□□ -1.63
CDH11P55287 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH11P55287 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 AL513321.1-201ENST00000441175 761 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AL158053.1-201ENST00000441503 453 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AL450023.1-201ENST00000450868 751 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH11P55287 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH11P55287 MTND6P32-201ENST00000457611 483 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AC026348.1-201ENST00000462549 1053 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AC021660.1-201ENST00000465006 554 ntBASIC4.88□□□□□ -1.63
CDH11P55287 RN7SL51P-201ENST00000468230 285 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AC104629.2-201ENST00000468627 598 ntBASIC4.88□□□□□ -1.63
CDH11P55287 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 OR2AO1P-201ENST00000476497 403 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH11P55287 AC092902.1-201ENST00000486999 259 ntBASIC4.88□□□□□ -1.63
CDH11P55287 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH11P55287 RN7SL547P-201ENST00000490793 290 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AC023424.1-201ENST00000496058 459 ntBASIC4.88□□□□□ -1.63
CDH11P55287 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 AC109464.1-201ENST00000511091 819 ntBASIC4.88□□□□□ -1.63
CDH11P55287 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH11P55287 SNORA76.2-201ENST00000517095 137 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AC027308.1-201ENST00000517993 110 ntBASIC4.88□□□□□ -1.63
CDH11P55287 VTA1P2-201ENST00000520205 911 ntBASIC4.88□□□□□ -1.63
CDH11P55287 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH11P55287 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.88□□□□□ -1.63
CDH11P55287 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.88□□□□□ -1.63
CDH11P55287 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 AC051619.2-201ENST00000559063 397 ntBASIC4.88□□□□□ -1.63
CDH11P55287 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.88□□□□□ -1.63
CDH11P55287 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.88□□□□□ -1.63
CDH11P55287 AC079148.1-201ENST00000565944 819 ntBASIC4.88□□□□□ -1.63
CDH11P55287 DPRXP4-201ENST00000578053 568 ntBASIC4.88□□□□□ -1.63
CDH11P55287 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 AL159169.2-201ENST00000610061 1269 ntBASIC4.88□□□□□ -1.63
CDH11P55287 SDR42E1P1-201ENST00000611327 477 ntBASIC4.88□□□□□ -1.63
CDH11P55287 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.88□□□□□ -1.63
CDH11P55287 MIR8080-201ENST00000622224 89 ntBASIC4.88□□□□□ -1.63
CDH11P55287 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.88□□□□□ -1.63
CDH11P55287 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CDH11P55287 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CDH11P55287 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms