Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SUMO2P19-201ENST00000518920 295 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGCS2P54868 MIR4277-201ENST00000578298 84 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 SS18L2P2-201ENST00000583960 235 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 AL445423.1-201ENST00000609941 536 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 AL162574.1-201ENST00000615702 950 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 AL157762.1-201ENST00000619612 415 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 AC139713.2-214ENST00000642059 1811 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGCS2P54868 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCS2P54868 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCS2P54868 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 CCAT2-201ENST00000630920 1752 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
HMGCS2P54868 U3.32-201ENST00000408116 212 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 AL158827.1-201ENST00000416300 391 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 AC004690.1-201ENST00000418216 328 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 AC006065.1-201ENST00000422539 802 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 RPL23AP1-201ENST00000428990 471 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 MED28P3-201ENST00000444288 531 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 ARL2BPP10-201ENST00000446487 531 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCS2P54868 RPS17P2-201ENST00000461663 408 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 IGBP1P5-201ENST00000507524 1000 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS2P54868 AL049839.1-201ENST00000556151 657 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 PARP1P2-201ENST00000556806 195 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS2P54868 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGCS2P54868 AC022726.1-201ENST00000587475 207 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCS2P54868 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGCS2P54868 AC010424.2-201ENST00000607594 443 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 AC016717.3-201ENST00000624730 554 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 AC007159.1-201ENST00000566529 4706 ntBASIC5.66□□□□□ -1.5
HMGCS2P54868 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGCS2P54868 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCS2P54868 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCS2P54868 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCS2P54868 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCS2P54868 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS2P54868 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS2P54868 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCS2P54868 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCS2P54868 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS2P54868 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.65□□□□□ -1.5
HMGCS2P54868 AC046176.1-201ENST00000435260 1170 ntBASIC5.65□□□□□ -1.5
HMGCS2P54868 AC103987.1-201ENST00000473394 348 ntBASIC5.65□□□□□ -1.5
HMGCS2P54868 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCS2P54868 IGKV2D-10-201ENST00000520194 281 ntBASIC5.65□□□□□ -1.5
HMGCS2P54868 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCS2P54868 AC133555.2-201ENST00000550213 292 ntBASIC5.65□□□□□ -1.5
HMGCS2P54868 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS2P54868 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCS2P54868 AC016252.1-201ENST00000609721 474 ntBASIC5.65□□□□□ -1.5
HMGCS2P54868 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.65□□□□□ -1.51
HMGCS2P54868 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
HMGCS2P54868 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.65□□□□□ -1.51
HMGCS2P54868 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCS2P54868 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.65□□□□□ -1.51
HMGCS2P54868 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HMGCS2P54868 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCS2P54868 RBPJP2-201ENST00000618187 1444 ntBASIC5.65□□□□□ -1.51
HMGCS2P54868 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS2P54868 SMG1P7-201ENST00000565246 2704 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMGCS2P54868 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS2P54868 IGKV7-3-201ENST00000357453 298 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 RPL7P58-201ENST00000402913 758 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 RNA5SP345-201ENST00000410646 108 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS2P54868 VDAC1P6-201ENST00000430062 855 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 MRPS21P3-201ENST00000436696 262 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 AL161722.1-201ENST00000446972 1032 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGCS2P54868 STRADBP1-201ENST00000478954 1281 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS2P54868 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGCS2P54868 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGCS2P54868 BUD31P1-201ENST00000521828 359 ntBASIC5.64□□□□□ -1.51
HMGCS2P54868 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms