Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 RNU4-7P-201ENST00000364758 141 ntBASIC5.83□□□□□ -1.48
COPAP53621 AC234772.1-201ENST00000377927 937 ntBASIC5.83□□□□□ -1.48
COPAP53621 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
COPAP53621 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.83□□□□□ -1.48
COPAP53621 RNU4-74P-201ENST00000411280 161 ntBASIC5.83□□□□□ -1.48
COPAP53621 MTCO2P8-201ENST00000412213 658 ntBASIC5.83□□□□□ -1.48
COPAP53621 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.83□□□□□ -1.48
COPAP53621 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 TNPO1P1-201ENST00000423641 1138 ntBASIC5.83□□□□□ -1.48
COPAP53621 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.83□□□□□ -1.48
COPAP53621 HSPE1P16-201ENST00000426640 348 ntBASIC5.83□□□□□ -1.48
COPAP53621 RPS27AP6-201ENST00000427962 448 ntBASIC5.83□□□□□ -1.48
COPAP53621 BRWD1P3-201ENST00000428816 390 ntBASIC5.83□□□□□ -1.48
COPAP53621 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.83□□□□□ -1.48
COPAP53621 AC012075.1-201ENST00000436549 580 ntBASIC5.83□□□□□ -1.48
COPAP53621 AL591623.2-201ENST00000449978 222 ntBASIC5.83□□□□□ -1.48
COPAP53621 AL133244.1-201ENST00000456007 258 ntBASIC5.83□□□□□ -1.48
COPAP53621 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 RPL21P18-201ENST00000469899 480 ntBASIC5.83□□□□□ -1.48
COPAP53621 SIAH1P1-201ENST00000479411 923 ntBASIC5.83□□□□□ -1.48
COPAP53621 AC108693.1-201ENST00000496068 432 ntBASIC5.83□□□□□ -1.48
COPAP53621 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 CDH12P2-201ENST00000504393 298 ntBASIC5.83□□□□□ -1.48
COPAP53621 AC108120.2-201ENST00000512973 294 ntBASIC5.83□□□□□ -1.48
COPAP53621 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.83□□□□□ -1.48
COPAP53621 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.83□□□□□ -1.48
COPAP53621 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.83□□□□□ -1.48
COPAP53621 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 AC126615.2-201ENST00000553003 515 ntBASIC5.83□□□□□ -1.48
COPAP53621 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.83□□□□□ -1.48
COPAP53621 AC007346.2-201ENST00000564816 892 ntBASIC5.83□□□□□ -1.48
COPAP53621 AC106734.1-201ENST00000568646 663 ntBASIC5.83□□□□□ -1.48
COPAP53621 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.83□□□□□ -1.48
COPAP53621 AC006116.5-201ENST00000591936 559 ntBASIC5.83□□□□□ -1.48
COPAP53621 AC013244.1-201ENST00000604279 193 ntBASIC5.83□□□□□ -1.48
COPAP53621 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.83□□□□□ -1.48
COPAP53621 AL359513.1-201ENST00000614364 557 ntBASIC5.83□□□□□ -1.48
COPAP53621 AL035661.1-201ENST00000620459 1144 ntBASIC5.83□□□□□ -1.48
COPAP53621 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.83□□□□□ -1.48
COPAP53621 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.82□□□□□ -1.48
COPAP53621 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPAP53621 HSPD1P11-201ENST00000508643 1702 ntBASIC5.82□□□□□ -1.48
COPAP53621 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.82□□□□□ -1.48
COPAP53621 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COPAP53621 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COPAP53621 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPAP53621 MFSD8-219ENST00000641228 2559 ntBASIC5.82□□□□□ -1.48
COPAP53621 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COPAP53621 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPAP53621 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
COPAP53621 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COPAP53621 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.82□□□□□ -1.48
COPAP53621 AC233289.1-201ENST00000403700 508 ntBASIC5.82□□□□□ -1.48
COPAP53621 UBE2V1P11-201ENST00000411559 285 ntBASIC5.82□□□□□ -1.48
COPAP53621 NPM1P4-201ENST00000414095 812 ntBASIC5.82□□□□□ -1.48
COPAP53621 TCEA1P2-201ENST00000420496 906 ntBASIC5.82□□□□□ -1.48
COPAP53621 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.82□□□□□ -1.48
COPAP53621 DEFB130D-201ENST00000426866 237 ntBASIC5.82□□□□□ -1.48
COPAP53621 USP12PY-201ENST00000427677 1064 ntBASIC5.82□□□□□ -1.48
COPAP53621 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.82□□□□□ -1.48
COPAP53621 MTND2P40-201ENST00000436718 841 ntBASIC5.82□□□□□ -1.48
COPAP53621 FABP5P3-201ENST00000437960 408 ntBASIC5.82□□□□□ -1.48
COPAP53621 AL390119.1-201ENST00000440329 312 ntBASIC5.82□□□□□ -1.48
COPAP53621 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.82□□□□□ -1.48
COPAP53621 AC104164.3-201ENST00000467363 1258 ntBASIC5.82□□□□□ -1.48
COPAP53621 AC090602.1-201ENST00000469695 252 ntBASIC5.82□□□□□ -1.48
COPAP53621 RPS3AP15-201ENST00000483874 781 ntBASIC5.82□□□□□ -1.48
COPAP53621 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.82□□□□□ -1.48
COPAP53621 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
COPAP53621 RN7SL184P-201ENST00000488308 297 ntBASIC5.82□□□□□ -1.48
COPAP53621 AC008427.1-201ENST00000503102 655 ntBASIC5.82□□□□□ -1.48
COPAP53621 AC096571.1-202ENST00000506634 735 ntBASIC5.82□□□□□ -1.48
COPAP53621 MIR2117-201ENST00000516780 80 ntBASIC5.82□□□□□ -1.48
COPAP53621 HIGD1AP18-201ENST00000520730 278 ntBASIC5.82□□□□□ -1.48
COPAP53621 AC010376.1-201ENST00000522101 334 ntBASIC5.82□□□□□ -1.48
COPAP53621 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.82□□□□□ -1.48
COPAP53621 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.82□□□□□ -1.48
COPAP53621 AC021451.1-201ENST00000523498 1129 ntBASIC5.82□□□□□ -1.48
COPAP53621 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.82□□□□□ -1.48
COPAP53621 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.82□□□□□ -1.48
COPAP53621 AL049870.4-201ENST00000555741 486 ntBASIC5.82□□□□□ -1.48
COPAP53621 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.82□□□□□ -1.48
COPAP53621 AC051619.2-201ENST00000559063 397 ntBASIC5.82□□□□□ -1.48
COPAP53621 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms