Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 VN1R105P-201ENST00000486595 910 ntBASIC5.09□□□□□ -1.59
BRCA2P51587 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.09□□□□□ -1.59
BRCA2P51587 AC112484.5-201ENST00000624189 228 ntBASIC5.09□□□□□ -1.59
BRCA2P51587 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.09□□□□□ -1.59
BRCA2P51587 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.09□□□□□ -1.59
BRCA2P51587 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCA2P51587 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 AL391684.1-202ENST00000641293 1636 ntBASIC5.09□□□□□ -1.59
BRCA2P51587 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.09□□□□□ -1.59
BRCA2P51587 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
BRCA2P51587 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
BRCA2P51587 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
BRCA2P51587 AL050321.1-201ENST00000432363 400 ntBASIC5.09□□□□□ -1.59
BRCA2P51587 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCA2P51587 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.09□□□□□ -1.59
BRCA2P51587 SOD1P3-201ENST00000518682 454 ntBASIC5.09□□□□□ -1.59
BRCA2P51587 AP003730.1-201ENST00000524605 285 ntBASIC5.09□□□□□ -1.59
BRCA2P51587 OR5BC1P-201ENST00000529327 739 ntBASIC5.09□□□□□ -1.59
BRCA2P51587 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.09□□□□□ -1.59
BRCA2P51587 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.09□□□□□ -1.59
BRCA2P51587 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BRCA2P51587 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.09□□□□□ -1.6
BRCA2P51587 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRCA2P51587 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
BRCA2P51587 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRCA2P51587 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRCA2P51587 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRCA2P51587 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
BRCA2P51587 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRCA2P51587 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRCA2P51587 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRCA2P51587 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.09□□□□□ -1.6
BRCA2P51587 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.09□□□□□ -1.6
BRCA2P51587 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.09□□□□□ -1.6
BRCA2P51587 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.09□□□□□ -1.6
BRCA2P51587 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
BRCA2P51587 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.09□□□□□ -1.6
BRCA2P51587 AL442067.2-201ENST00000614033 363 ntBASIC5.09□□□□□ -1.6
BRCA2P51587 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
BRCA2P51587 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.09□□□□□ -1.6
BRCA2P51587 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
BRCA2P51587 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BRCA2P51587 AC097374.1-203ENST00000400783 485 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 AC046176.1-201ENST00000435260 1170 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 AC007967.1-201ENST00000455422 1159 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
BRCA2P51587 RNA5SP223-201ENST00000365174 120 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.08□□□□□ -1.6
BRCA2P51587 AC146944.2-203ENST00000502493 354 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 ENPP7P11-201ENST00000505915 627 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 AC139495.1-202ENST00000513164 354 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.08□□□□□ -1.6
BRCA2P51587 AL683813.2-201ENST00000605245 502 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 SNORA51-201ENST00000606420 132 ntBASIC5.08□□□□□ -1.6
BRCA2P51587 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.08□□□□□ -1.6
BRCA2P51587 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
BRCA2P51587 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRCA2P51587 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
BRCA2P51587 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
BRCA2P51587 BTF3P10-201ENST00000433415 495 ntBASIC5.07□□□□□ -1.6
BRCA2P51587 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCA2P51587 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCA2P51587 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCA2P51587 AC022884.2-201ENST00000578535 580 ntBASIC5.07□□□□□ -1.6
BRCA2P51587 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCA2P51587 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCA2P51587 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 AL132838.2-201ENST00000492041 314 ntBASIC5.07□□□□□ -1.6
BRCA2P51587 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCA2P51587 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCA2P51587 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCA2P51587 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms