Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 BX510359.5-201ENST00000515651 304 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC025857.1-201ENST00000525252 377 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CR1P49238 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.47□□□□□ -1.69
CX3CR1P49238 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CR1P49238 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.47□□□□□ -1.69
CX3CR1P49238 GMCL1P2-201ENST00000605230 823 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 MIR6837-201ENST00000620884 64 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CX3CR1P49238 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CX3CR1P49238 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CX3CR1P49238 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CR1P49238 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CR1P49238 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CX3CR1P49238 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CR1P49238 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CR1P49238 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CX3CR1P49238 RN7SKP113-201ENST00000363891 295 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CR1P49238 SNORA2.3-201ENST00000383920 135 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 MIR1182-201ENST00000408363 97 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 OR3A2-201ENST00000408891 1076 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 RPL35AP24-201ENST00000413846 330 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AL139148.1-201ENST00000427122 680 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CR1P49238 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CR1P49238 RPL35AP21-201ENST00000437667 333 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AP000936.3-201ENST00000438127 255 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CR1P49238 SPRYD7P1-201ENST00000443861 570 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC004980.3-201ENST00000447046 365 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CR1P49238 RPL7P39-201ENST00000481157 744 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CR1P49238 RPL7P51-201ENST00000490532 749 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AP000926.3-201ENST00000497201 299 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AC104109.1-201ENST00000498563 436 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AC105031.1-201ENST00000518550 476 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC134349.2-201ENST00000535136 910 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AC024940.3-201ENST00000538551 316 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CR1P49238 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CR1P49238 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CR1P49238 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AL049779.2-201ENST00000553847 315 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 SETP1-201ENST00000556014 845 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AL390334.1-201ENST00000556395 450 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 NDUFB4P11-201ENST00000560510 395 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 ADAM3B-201ENST00000569937 840 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AP005901.4-201ENST00000577336 569 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AL592494.3-201ENST00000609485 464 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CR1P49238 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC090527.3-201ENST00000619041 548 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AF117829.2-201ENST00000619538 361 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AP001005.3-201ENST00000622049 129 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 AC015722.2-201ENST00000622210 551 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CR1P49238 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CX3CR1P49238 AC011493.1-201ENST00000596753 1632 ntBASIC4.46□□□□□ -1.7
CX3CR1P49238 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
CX3CR1P49238 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CR1P49238 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.45□□□□□ -1.7
CX3CR1P49238 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CX3CR1P49238 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CX3CR1P49238 OR10AB1P-202ENST00000641219 1686 ntBASIC4.45□□□□□ -1.7
CX3CR1P49238 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CR1P49238 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CR1P49238 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms