Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MTCO3P27-201ENST00000514397 196 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 RNA5SP116-201ENST00000516132 98 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.16□□□□□ -1.42
TM4SF4P48230 IGKV1-32-201ENST00000519290 311 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.16□□□□□ -1.42
TM4SF4P48230 AL110118.1-201ENST00000553543 400 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 AC068620.3-201ENST00000602749 560 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.16□□□□□ -1.42
TM4SF4P48230 HIRAP1-201ENST00000605318 787 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 AL627230.1-201ENST00000613077 211 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 AL591926.8-201ENST00000616876 211 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 AC022960.3-201ENST00000619794 441 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.16□□□□□ -1.42
TM4SF4P48230 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TM4SF4P48230 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TM4SF4P48230 SAMMSON-210ENST00000641260 1308 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TM4SF4P48230 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.16□□□□□ -1.42
TM4SF4P48230 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TM4SF4P48230 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TM4SF4P48230 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TM4SF4P48230 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TM4SF4P48230 SNX18P3-202ENST00000565670 1750 ntBASIC6.16□□□□□ -1.42
TM4SF4P48230 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TM4SF4P48230 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TM4SF4P48230 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
TM4SF4P48230 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TM4SF4P48230 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TM4SF4P48230 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
TM4SF4P48230 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TM4SF4P48230 RNU6-252P-201ENST00000363232 107 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 RNU6-666P-201ENST00000363499 107 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 RNU1-146P-201ENST00000364015 165 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TM4SF4P48230 MIR105-1-201ENST00000385222 81 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 HMGB1P13-201ENST00000406019 642 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AC096921.1-201ENST00000411661 375 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 AC008173.1-201ENST00000418901 264 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.15□□□□□ -1.42
TM4SF4P48230 AL035458.1-201ENST00000433096 585 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AC092685.1-201ENST00000447960 1243 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 HMGB1P5-202ENST00000451497 985 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.15□□□□□ -1.42
TM4SF4P48230 TRBV5-2-201ENST00000489095 273 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AC026979.1-201ENST00000492525 396 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.15□□□□□ -1.42
TM4SF4P48230 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.15□□□□□ -1.42
TM4SF4P48230 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.15□□□□□ -1.42
TM4SF4P48230 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.15□□□□□ -1.42
TM4SF4P48230 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.15□□□□□ -1.42
TM4SF4P48230 AC087894.1-201ENST00000538359 518 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.15□□□□□ -1.42
TM4SF4P48230 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.15□□□□□ -1.42
TM4SF4P48230 AC124283.4-201ENST00000581815 456 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AC011458.1-201ENST00000604034 617 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.15□□□□□ -1.42
TM4SF4P48230 AL356274.1-201ENST00000617064 410 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AC004836.1-201ENST00000623032 634 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.15□□□□□ -1.42
TM4SF4P48230 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.15□□□□□ -1.42
TM4SF4P48230 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TM4SF4P48230 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.15□□□□□ -1.43
TM4SF4P48230 AC008432.1-201ENST00000615912 1320 ntBASIC6.15□□□□□ -1.43
TM4SF4P48230 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TM4SF4P48230 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TM4SF4P48230 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.15□□□□□ -1.43
TM4SF4P48230 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.15□□□□□ -1.43
TM4SF4P48230 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.15□□□□□ -1.43
TM4SF4P48230 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.15□□□□□ -1.43
TM4SF4P48230 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.15□□□□□ -1.43
TM4SF4P48230 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
TM4SF4P48230 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TM4SF4P48230 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TM4SF4P48230 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
TM4SF4P48230 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM4SF4P48230 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
TM4SF4P48230 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TM4SF4P48230 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
TM4SF4P48230 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TM4SF4P48230 HSPD1P11-201ENST00000508643 1702 ntBASIC6.14□□□□□ -1.43
TM4SF4P48230 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM4SF4P48230 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM4SF4P48230 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TM4SF4P48230 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TM4SF4P48230 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM4SF4P48230 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.14□□□□□ -1.43
TM4SF4P48230 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM4SF4P48230 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TM4SF4P48230 U3.3-201ENST00000362986 216 ntBASIC6.14□□□□□ -1.43
TM4SF4P48230 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.14□□□□□ -1.43
TM4SF4P48230 HSPA8P15-201ENST00000401676 786 ntBASIC6.14□□□□□ -1.43
TM4SF4P48230 MIR1182-201ENST00000408363 97 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms