Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEDD4P46934 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.75□□□□□ -1.49
NEDD4P46934 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NEDD4P46934 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.75□□□□□ -1.49
NEDD4P46934 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.75□□□□□ -1.49
NEDD4P46934 UBBP2-201ENST00000376781 231 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 SNORA81-201ENST00000408493 178 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.74□□□□□ -1.49
NEDD4P46934 AL360081.1-201ENST00000428299 555 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEDD4P46934 RN7SL517P-201ENST00000462240 305 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 ENPP7P9-201ENST00000514456 627 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.74□□□□□ -1.49
NEDD4P46934 AL049830.4-201ENST00000555149 351 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 BGLT3-201ENST00000564523 994 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.74□□□□□ -1.49
NEDD4P46934 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.74□□□□□ -1.49
NEDD4P46934 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEDD4P46934 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEDD4P46934 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEDD4P46934 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEDD4P46934 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.74□□□□□ -1.49
NEDD4P46934 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NEDD4P46934 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
NEDD4P46934 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEDD4P46934 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEDD4P46934 RN7SKP186-201ENST00000365371 303 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.74□□□□□ -1.49
NEDD4P46934 AC007559.1-201ENST00000428736 355 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.74□□□□□ -1.49
NEDD4P46934 AC008072.1-201ENST00000434254 824 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 TPTE2P1-204ENST00000435256 593 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 SLC25A18P1-201ENST00000449385 454 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 AC234781.3-201ENST00000452540 973 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.74□□□□□ -1.49
NEDD4P46934 RPL5P16-201ENST00000471467 790 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.74□□□□□ -1.49
NEDD4P46934 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.74□□□□□ -1.49
NEDD4P46934 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.74□□□□□ -1.49
NEDD4P46934 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.74□□□□□ -1.49
NEDD4P46934 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.74□□□□□ -1.49
NEDD4P46934 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.74□□□□□ -1.49
NEDD4P46934 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.74□□□□□ -1.49
NEDD4P46934 AC015849.6-201ENST00000605454 474 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.74□□□□□ -1.49
NEDD4P46934 AL049539.1-201ENST00000611964 459 ntBASIC5.74□□□□□ -1.49
NEDD4P46934 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
NEDD4P46934 AC112198.2-201ENST00000426589 6996 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.73□□□□□ -1.49
NEDD4P46934 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NEDD4P46934 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEDD4P46934 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.73□□□□□ -1.49
NEDD4P46934 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEDD4P46934 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NEDD4P46934 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEDD4P46934 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEDD4P46934 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEDD4P46934 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NEDD4P46934 AL449283.1-201ENST00000602631 3403 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NEDD4P46934 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.73□□□□□ -1.49
NEDD4P46934 AC104623.2-202ENST00000623477 4002 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 RNA5SP87-201ENST00000384155 118 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NEDD4P46934 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.73□□□□□ -1.49
NEDD4P46934 RNA5SP113-201ENST00000410486 84 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.73□□□□□ -1.49
NEDD4P46934 AL121878.1-201ENST00000418638 859 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.73□□□□□ -1.49
NEDD4P46934 RBMY2TP-201ENST00000451162 947 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 AC092324.1-201ENST00000468671 324 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 AC069304.1-201ENST00000491593 704 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 AC231760.1-201ENST00000498002 260 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.73□□□□□ -1.49
NEDD4P46934 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.73□□□□□ -1.49
NEDD4P46934 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.73□□□□□ -1.49
NEDD4P46934 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.73□□□□□ -1.49
NEDD4P46934 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.73□□□□□ -1.49
NEDD4P46934 AC093249.4-201ENST00000564755 259 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 AC009852.2-201ENST00000567898 485 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 MIR4737-201ENST00000583979 81 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 AC004948.1-201ENST00000609858 672 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 AC007497.1-201ENST00000610421 561 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.73□□□□□ -1.49
NEDD4P46934 AP001784.1-201ENST00000624107 428 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 CR381572.2-201ENST00000624852 397 ntBASIC5.73□□□□□ -1.49
NEDD4P46934 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.73□□□□□ -1.49
NEDD4P46934 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD4P46934 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD4P46934 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.72□□□□□ -1.49
NEDD4P46934 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD4P46934 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.72□□□□□ -1.49
NEDD4P46934 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD4P46934 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NEDD4P46934 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD4P46934 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD4P46934 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NEDD4P46934 GAPDHP15-201ENST00000398586 975 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms