Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.92□□□□□ -1.62
SHMT2P34897 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.92□□□□□ -1.62
SHMT2P34897 RN7SL808P-201ENST00000496066 299 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.92□□□□□ -1.62
SHMT2P34897 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 AL021707.7-201ENST00000607991 416 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC015914.2-201ENST00000618167 288 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 AC015871.5-202ENST00000623252 701 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 AC087821.1-201ENST00000623639 567 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 AC007996.1-201ENST00000620414 2821 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHMT2P34897 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHMT2P34897 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SHMT2P34897 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
SHMT2P34897 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 SOCS5P3-201ENST00000425115 1576 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.91□□□□□ -1.62
SHMT2P34897 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.91□□□□□ -1.62
SHMT2P34897 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.91□□□□□ -1.62
SHMT2P34897 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.91□□□□□ -1.62
SHMT2P34897 RNA5SP455-201ENST00000365190 119 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 RNA5SP296-201ENST00000410523 111 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 RNU2-22P-201ENST00000411266 212 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.91□□□□□ -1.62
SHMT2P34897 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.91□□□□□ -1.62
SHMT2P34897 OR7E125P-201ENST00000443450 846 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
SHMT2P34897 RN7SL97P-201ENST00000486780 299 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 RN7SL441P-201ENST00000492388 296 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.91□□□□□ -1.62
SHMT2P34897 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.91□□□□□ -1.62
SHMT2P34897 AC010350.1-201ENST00000504908 231 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 AP000676.2-201ENST00000529711 301 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.91□□□□□ -1.62
SHMT2P34897 NDUFB4P11-201ENST00000560510 395 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.91□□□□□ -1.62
SHMT2P34897 AC011840.5-201ENST00000582125 771 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 RN7SL435P-201ENST00000584418 282 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.91□□□□□ -1.62
SHMT2P34897 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 AC105254.2-201ENST00000603636 436 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 AC087468.1-201ENST00000604365 630 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.91□□□□□ -1.62
SHMT2P34897 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.91□□□□□ -1.62
SHMT2P34897 AP000648.2-201ENST00000624182 404 ntBASIC4.91□□□□□ -1.62
SHMT2P34897 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.91□□□□□ -1.62
SHMT2P34897 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SHMT2P34897 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.91□□□□□ -1.62
SHMT2P34897 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.91□□□□□ -1.62
SHMT2P34897 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHMT2P34897 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SHMT2P34897 SYT14P1-202ENST00000600441 1448 ntBASIC4.9□□□□□ -1.62
SHMT2P34897 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHMT2P34897 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.9□□□□□ -1.62
SHMT2P34897 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
SHMT2P34897 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.9□□□□□ -1.62
SHMT2P34897 AL645733.1-201ENST00000402250 217 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 AL589647.1-201ENST00000402485 466 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 AL359643.1-201ENST00000404109 423 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 MIR1271-201ENST00000408537 86 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHMT2P34897 GJA6P-201ENST00000415117 1042 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 LYPLA1P1-201ENST00000434514 622 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 RPL32P9-201ENST00000487963 407 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 AC005412.2-201ENST00000492004 341 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SHMT2P34897 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.9□□□□□ -1.63
SHMT2P34897 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.9□□□□□ -1.63
SHMT2P34897 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.9□□□□□ -1.63
SHMT2P34897 AC007448.1-201ENST00000582714 234 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 MIR4691-201ENST00000583764 85 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 AC018695.5-201ENST00000605872 315 ntBASIC4.9□□□□□ -1.63
SHMT2P34897 AL627230.1-201ENST00000613077 211 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms