Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC6A4P31645 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC6A4P31645 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC6A4P31645 SNORD116-8-201ENST00000384365 95 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.84□□□□□ -1.47
SLC6A4P31645 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 RNU4-22P-201ENST00000411058 166 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AL035458.1-201ENST00000433096 585 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 CLUHP1-201ENST00000435012 1190 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 LDHAP2-201ENST00000437325 985 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AC006335.2-201ENST00000437993 330 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AL390119.1-201ENST00000440329 312 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC092647.3-201ENST00000443044 633 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 CYCSP51-201ENST00000443545 318 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 MTND6P5-201ENST00000448266 512 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AL589880.1-201ENST00000448271 287 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 HMGB1P5-202ENST00000451497 985 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC6A4P31645 RPS27AP16-201ENST00000492222 470 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 RN7SL466P-201ENST00000497546 295 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 DUTP7-201ENST00000507982 486 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AC008837.1-201ENST00000511513 412 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 SNORA31.13-201ENST00000516624 135 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 MRPS36P3-201ENST00000519284 130 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC013701.1-201ENST00000522657 465 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC6A4P31645 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC007225.2-201ENST00000562529 256 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AL163952.1-202ENST00000569625 600 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC061975.8-201ENST00000587058 721 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 VN1R78P-201ENST00000597393 564 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AC107952.2-201ENST00000606048 486 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AC080013.6-201ENST00000606185 215 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC6A4P31645 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 AL691477.1-201ENST00000624398 162 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC139713.2-210ENST00000641741 992 ntBASIC5.84□□□□□ -1.47
SLC6A4P31645 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC6A4P31645 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC6A4P31645 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC6A4P31645 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC6A4P31645 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC6A4P31645 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SLC6A4P31645 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
SLC6A4P31645 AC130360.2-201ENST00000533477 1556 ntBASIC5.84□□□□□ -1.48
SLC6A4P31645 PWAR1-201ENST00000624188 2414 ntBASIC5.84□□□□□ -1.48
SLC6A4P31645 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SLC6A4P31645 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.84□□□□□ -1.48
SLC6A4P31645 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.83□□□□□ -1.48
SLC6A4P31645 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SLC6A4P31645 AC233289.1-201ENST00000403700 508 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 FCF1P5-201ENST00000406490 482 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC6A4P31645 RPS3AP37-201ENST00000419176 745 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AL133173.1-201ENST00000423458 397 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 TNPO1P1-201ENST00000423641 1138 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.83□□□□□ -1.48
SLC6A4P31645 AC093084.1-201ENST00000424233 687 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC021876.1-201ENST00000425959 359 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 VN1R21P-201ENST00000426703 765 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC012075.1-201ENST00000436549 580 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC6A4P31645 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC6A4P31645 AC092685.1-201ENST00000447960 1243 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 TRY2P-201ENST00000448860 689 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AL450023.1-201ENST00000450868 751 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.83□□□□□ -1.48
SLC6A4P31645 RPL7P32-201ENST00000457119 744 ntBASIC5.83□□□□□ -1.48
SLC6A4P31645 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.83□□□□□ -1.48
SLC6A4P31645 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms