Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA9P31269 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.26□□□□□ -1.57
HOXA9P31269 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA9P31269 SEPT7P2-202ENST00000398921 823 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 AL050305.1-201ENST00000399993 1230 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 RPL19P16-201ENST00000433839 588 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA9P31269 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA9P31269 RPL5P22-201ENST00000480199 884 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 RN7SL441P-201ENST00000492388 296 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 IMPA1P1-201ENST00000510718 842 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA9P31269 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA9P31269 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXA9P31269 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA9P31269 MIR4660-201ENST00000583549 74 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 EIF1P5-201ENST00000585002 234 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA9P31269 AC020910.3-201ENST00000603701 874 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 AC008745.1-201ENST00000604064 271 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 AC244517.3-201ENST00000616254 1235 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 MTCO1P15-201ENST00000529569 1526 ntBASIC5.26□□□□□ -1.57
HOXA9P31269 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HOXA9P31269 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA9P31269 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA9P31269 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA9P31269 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA9P31269 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA9P31269 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA9P31269 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA9P31269 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
HOXA9P31269 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA9P31269 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA9P31269 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
HOXA9P31269 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA9P31269 AL390316.1-201ENST00000406279 553 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 GTF2IP5-201ENST00000414608 731 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 AC010740.1-201ENST00000417035 684 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 HYALP1-201ENST00000417674 1279 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 BX510359.2-201ENST00000417920 305 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA9P31269 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.25□□□□□ -1.57
HOXA9P31269 OR1H1P-201ENST00000448731 937 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 GAPDHP14-201ENST00000450472 937 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 AURKAPS2-201ENST00000454983 333 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 NDUFA12P1-201ENST00000455914 406 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXA9P31269 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA9P31269 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA9P31269 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA9P31269 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA9P31269 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA9P31269 LDHBP3-201ENST00000514909 822 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 AL512310.9-201ENST00000553311 948 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
HOXA9P31269 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA9P31269 AL023583.1-201ENST00000607518 1143 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 OR51C1P-201ENST00000608504 942 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA9P31269 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXA9P31269 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HOXA9P31269 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.25□□□□□ -1.57
HOXA9P31269 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXA9P31269 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HOXA9P31269 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXA9P31269 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXA9P31269 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 RNA5SP505-201ENST00000364748 108 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXA9P31269 RPS3AP23-201ENST00000401762 784 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 AC092017.2-201ENST00000427600 362 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 COX6CP13-201ENST00000428703 226 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXA9P31269 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.24□□□□□ -1.57
HOXA9P31269 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXA9P31269 AC098976.1-201ENST00000513014 541 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 ENPP7P9-201ENST00000514456 627 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 RNA5SP230-201ENST00000517039 122 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 AC138832.1-201ENST00000522871 556 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXA9P31269 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXA9P31269 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXA9P31269 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXA9P31269 RN7SL690P-201ENST00000582087 240 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 MIR4697-201ENST00000582977 78 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 MIR5096-201ENST00000583713 70 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 AC006363.1-201ENST00000603806 463 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 SAMMSON-226ENST00000642089 1582 ntBASIC5.24□□□□□ -1.57
HOXA9P31269 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXA9P31269 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA9P31269 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms