Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
CLIP1P30622 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP1P30622 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP1P30622 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CLIP1P30622 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP1P30622 AC063976.2-201ENST00000425667 3556 ntBASIC7.68□□□□□ -1.18
CLIP1P30622 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.68□□□□□ -1.18
CLIP1P30622 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP1P30622 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP1P30622 AC105031.1-201ENST00000518550 476 ntBASIC7.68□□□□□ -1.18
CLIP1P30622 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.68□□□□□ -1.18
CLIP1P30622 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.68□□□□□ -1.18
CLIP1P30622 MRPS21P9-201ENST00000571150 257 ntBASIC7.68□□□□□ -1.18
CLIP1P30622 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP1P30622 AL121932.1-201ENST00000605542 214 ntBASIC7.68□□□□□ -1.18
CLIP1P30622 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP1P30622 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP1P30622 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP1P30622 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.67□□□□□ -1.18
CLIP1P30622 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP1P30622 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.67□□□□□ -1.18
CLIP1P30622 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP1P30622 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP1P30622 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP1P30622 SNORA70.2-201ENST00000364506 135 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 RPL7P58-201ENST00000402913 758 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 ARL4AP5-201ENST00000404372 599 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.67□□□□□ -1.18
CLIP1P30622 SNORA11-201ENST00000408789 128 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 VN1R37P-201ENST00000419096 748 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 RPS27AP7-201ENST00000422792 455 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 RPS17P8-201ENST00000434525 335 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 RPL35AP21-201ENST00000437667 333 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.67□□□□□ -1.18
CLIP1P30622 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.67□□□□□ -1.18
CLIP1P30622 Y_RNA.719-201ENST00000517156 106 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 AC133555.2-201ENST00000550213 292 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.67□□□□□ -1.18
CLIP1P30622 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.67□□□□□ -1.18
CLIP1P30622 AL034374.2-201ENST00000605281 548 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 AC243960.7-201ENST00000623532 707 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 AP000648.2-201ENST00000624182 404 ntBASIC7.67□□□□□ -1.18
CLIP1P30622 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP1P30622 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.66□□□□□ -1.18
CLIP1P30622 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC7.66□□□□□ -1.18
CLIP1P30622 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CLIP1P30622 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CLIP1P30622 RPL32P3-201ENST00000359025 275 ntBASIC7.66□□□□□ -1.18
CLIP1P30622 P2RY10P2-201ENST00000416730 913 ntBASIC7.66□□□□□ -1.18
CLIP1P30622 AC009480.2-201ENST00000422916 432 ntBASIC7.66□□□□□ -1.18
CLIP1P30622 AC079168.2-201ENST00000453977 416 ntBASIC7.66□□□□□ -1.18
CLIP1P30622 RPS23P7-201ENST00000466210 444 ntBASIC7.66□□□□□ -1.18
CLIP1P30622 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.66□□□□□ -1.18
CLIP1P30622 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 MIR4660-201ENST00000583549 74 ntBASIC7.66□□□□□ -1.18
CLIP1P30622 AC073091.2-201ENST00000603205 907 ntBASIC7.66□□□□□ -1.18
CLIP1P30622 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.66□□□□□ -1.18
CLIP1P30622 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 Z98755.1-201ENST00000407015 1384 ntBASIC7.66□□□□□ -1.18
CLIP1P30622 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC7.66□□□□□ -1.18
CLIP1P30622 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
CLIP1P30622 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CLIP1P30622 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP1P30622 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP1P30622 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP1P30622 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP1P30622 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
CLIP1P30622 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CLIP1P30622 SNORA70F-201ENST00000384142 135 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 RNU1-82P-201ENST00000390851 165 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 AL049697.2-201ENST00000403708 294 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 AC007738.1-201ENST00000413892 348 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 AC097523.2-201ENST00000435551 652 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 AC010326.1-201ENST00000462726 602 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 AC068587.1-201ENST00000483613 781 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.65□□□□□ -1.18
CLIP1P30622 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.65□□□□□ -1.18
CLIP1P30622 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.65□□□□□ -1.18
CLIP1P30622 AC136624.4-201ENST00000573044 370 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.65□□□□□ -1.18
CLIP1P30622 AC021106.3-201ENST00000623925 531 ntBASIC7.65□□□□□ -1.18
CLIP1P30622 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CLIP1P30622 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.65□□□□□ -1.19
CLIP1P30622 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CLIP1P30622 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CLIP1P30622 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.19
CLIP1P30622 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.64□□□□□ -1.19
CLIP1P30622 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CLIP1P30622 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.64□□□□□ -1.19
CLIP1P30622 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CLIP1P30622 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC7.64□□□□□ -1.19
CLIP1P30622 MIR133A2-201ENST00000347538 102 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms